Pairwise Alignments

Query, 390 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 551 a.a., Flagellin FliC from Variovorax sp. SCN45

 Score =  170 bits (431), Expect = 8e-47
 Identities = 116/287 (40%), Positives = 159/287 (55%), Gaps = 20/287 (6%)

Query: 4   INTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGLSVA 63
           INTN +S+  Q NL  + ++L +++ RLSSG+R+NSAKDDAAG AI+ R  A ++GL+ A
Sbjct: 5   INTNSLSLLTQNNLNKSQAALNSAIGRLSSGMRINSAKDDAAGQAIANRFTANIKGLTQA 64

Query: 64  ARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRSEID 123
            RNANDGIS+AQT EGAL +V + LQR+REL+VQ+   +N+++D  ++Q E+TQ   EI+
Sbjct: 65  TRNANDGISIAQTTEGALTEVNNNLQRIRELSVQAGTGTNSATDLDSIQGEITQRLDEIN 124

Query: 124 RVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAID-SIVSANSTALGQLSATEHFVAAV 182
           RV+  T FNG K+L       T QVGAN GE I ID   +SA +  L   +     V+A 
Sbjct: 125 RVSNQTQFNGVKVLSANAGKLTVQVGANDGETIDIDLQEISAKTLGLDGFNVNGKGVSA- 183

Query: 183 AAPSTAANA-----AIPAGTAGWSIKNAAGVDVALGGIGA----STTAAQRTTQVVDAIN 233
              +T AN      A   GT  +++  +     A   + A    +T     TT   DA  
Sbjct: 184 ---NTKANVNDLTKAGATGTGPYTVTTSFAKVTAEQAVDAMQDGNTAVVGATTYKYDATA 240

Query: 234 AKSADTGVFARETGAGAYEIFSSRDLTAATDFGAAFTAAATGAPGDT 280
                T   A  TG G    F++  L  A   G  FT   TGA G T
Sbjct: 241 GNFTTTATVA--TG-GPTTAFAATLLPTA---GNKFTGTFTGASGST 281



 Score =  111 bits (277), Expect = 6e-29
 Identities = 113/408 (27%), Positives = 173/408 (42%), Gaps = 68/408 (16%)

Query: 7   NVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGL--AISERMNAQVRGLSVAA 64
           NV  +T     GT   ++ TS  ++++   V++ +D    +  A + + +A     +  A
Sbjct: 188 NVNDLTKAGATGTGPYTVTTSFAKVTAEQAVDAMQDGNTAVVGATTYKYDATAGNFTTTA 247

Query: 65  RNANDGISLAQTAE--------------GALGKVGDMLQRMRELAV--QSANASNNSSDR 108
             A  G + A  A               GA G     +     + +  Q+A  S  +   
Sbjct: 248 TVATGGPTTAFAATLLPTAGNKFTGTFTGASGSTNFEVDSAGAITIGGQAAYISGGNLTT 307

Query: 109 TALQAEVTQLRSEIDRVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAIDSIVSANSTA 168
             + A      + +   A T +   +  L+GT    T+   A A  G      VS +   
Sbjct: 308 NNVGAPPAATAATLFGGADTGTGASSIKLNGT----TYNFAAGANSGFTYTKTVSKDDVK 363

Query: 169 LGQLSATEHFVAAVAAPSTAANAAIPAGTAGWSIKNAAGVDVALGGIGASTTAAQRTTQ- 227
                       A AA +      I A T  ++       D  +      T  A  TT  
Sbjct: 364 TA---------VAGAASTVNLGQGIFASTVTFAAAGGQSSDTYMDNDKEMTKTASYTTDY 414

Query: 228 VVDAIN-----AKSADTGVFARETGAGAYEIFSSRDLTAATDFGAAFTAAATGAPGDTAP 282
            V+A+N     A +  TG +A + GA AY I S+  LT                  DT  
Sbjct: 415 AVNAVNGEVTVASTTGTGKYAAQVGATAY-INSAGKLTT-----------------DTTS 456

Query: 283 PGTLTTLSAINVNSFGDAQKALQVIDKAINSINSSRADLGALQSRFENAVANIQITGENI 342
            GT TT               L  +D A+  +++ R  LGA+Q+RF++ +AN+  T  N+
Sbjct: 457 KGTKTT-------------DPLAALDAALAKVDTLRGSLGAVQNRFDSVIANLGTTVTNL 503

Query: 343 SAARGRIVDADFAKETSNLSRAQILQQAGTAMVAQANQAQQGVLSLLR 390
           S++R RI DAD+A E SN++RAQILQQAGT++++QANQ  QGVLSLLR
Sbjct: 504 SSSRSRIEDADYAVEVSNMTRAQILQQAGTSVLSQANQTTQGVLSLLR 551