Pairwise Alignments

Query, 390 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 687 a.a., flagellin, filament structural protein from Pseudomonas putida KT2440

 Score =  214 bits (545), Expect = 6e-60
 Identities = 154/415 (37%), Positives = 220/415 (53%), Gaps = 46/415 (11%)

Query: 3   TINTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGLSV 62
           T+NTN+ SM+ Q+NL  +S +L T+M RLSSGL++NSAKDDAAGL IS R+  Q++GLSV
Sbjct: 4   TVNTNITSMSVQKNLNKSSDALGTTMGRLSSGLKINSAKDDAAGLQISNRLTTQIKGLSV 63

Query: 63  AARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRSEI 122
           A +NANDGIS+AQTAEGA+   G+++QRMRELA+QSAN SN+  DR ++Q E T L  E+
Sbjct: 64  AVKNANDGISIAQTAEGAMATSGNIMQRMRELALQSANGSNSDDDRASMQQEFTALSGEL 123

Query: 123 DRVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAID-SIVSANS--------TALGQLS 173
            R+A TT+F G  LLDGTF+ ++FQVGAN+ E I+     VSA S        +  G ++
Sbjct: 124 TRIANTTTFGGRNLLDGTFSGSSFQVGANSNESISFGMKDVSATSMKGNYNEASVAGGVA 183

Query: 174 ATEHFVAAVAAPSTAANA----AIPAGTAGWSIKNAAGVDVALG----GIGASTT----A 221
             +  V   A      NA    A   GTAG  + +   +  A G     +G +TT    A
Sbjct: 184 TLQASVTGAAGKFGTNNAGSTSASVVGTAGAGVFDKPTIGAAAGNLVLNVGTTTTTIAAA 243

Query: 222 AQRTTQ-VVDAINAKSADTGVFA---------RETGAGAYEIFSSRDLTAATDFGAAFTA 271
           A  T Q VVD IN ++++TGV A         +  G  A+ I +S D   +T  G A   
Sbjct: 244 AGDTLQDVVDNINLETSNTGVTASIDSATGALKLDGTQAFTIDASTDDVLSTALGLAEAG 303

Query: 272 AATGAPGDTA--PPGTLTTLSA--INVNSFGDAQKALQVIDKAINSINSSRADLGALQSR 327
            A  +   TA    G L    A  + + S   A  A   +   +  +N+     G   S 
Sbjct: 304 GAQLSKTGTANLRDGVLGAGGAGNLTLGSTNIALVATDTLSSVVGKVNAQTGTTGVTAS- 362

Query: 328 FENAVANIQI---TGENISAARGRIV-------DADFAKETSNLSRAQILQQAGT 372
            ++A   +++    G ++    G +            A +T+ L+ A  +   GT
Sbjct: 363 IDSATGQLKLNSAAGFDVGGTAGTLTGLGLTAGSVAIAPQTTGLASAASIDINGT 417



 Score =  127 bits (318), Expect = 1e-33
 Identities = 97/293 (33%), Positives = 141/293 (48%), Gaps = 17/293 (5%)

Query: 110 ALQAEVTQLRS--EIDRVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAIDSIVSANST 167
           A+  + T L S   ID    T +F     LD    N         G G A+  + + N  
Sbjct: 398 AIAPQTTGLASAASIDINGTTFNFAQGDDLDAIVDNINNNGAGAVGSGTALTGVTAKNDN 457

Query: 168 A-LGQLSATEHFV-----AAVAAPSTAANAAIPAGTAGWSIKNAAGVDVALGGIGASTTA 221
             L   SA    +     + V      A   + +GT    +   A   ++L G+      
Sbjct: 458 GRLVLTSANGQDIKLDNGSGVTGQGALAAVGLNSGTTKAGL--VADTSISLNGVEVKFKK 515

Query: 222 AQRTTQVVDAINAKSADTGVFAR---ETGAGAYEIFSSRDLTAATDFGAAFTAAA--TGA 276
                 +  +INA  A TGV A      G+    +F+ +D+T A        AA   T  
Sbjct: 516 GDDMDSIAASINA--ASTGVNASVVVNAGSSTLSLFADQDITVADGSNGTGLAALGLTAV 573

Query: 277 PGDTAPPGTLTTLSAINVNSFGDAQKALQVIDKAINSINSSRADLGALQSRFENAVANIQ 336
            G T+     +T+S +N+     AQ+A+QV+D A+ S++S R+ LGA+Q+RF++ VAN+Q
Sbjct: 574 AGKTSAVEMESTVSNLNITDAQSAQQAIQVLDGAMQSLDSQRSQLGAVQNRFDSTVANLQ 633

Query: 337 ITGENISAARGRIVDADFAKETSNLSRAQILQQAGTAMVAQANQAQQGVLSLL 389
              EN +AAR RI DADFA ET+ LS+ Q LQQA TA+++QANQ    VL LL
Sbjct: 634 SISENSTAARSRIQDADFAAETAELSKQQTLQQASTAILSQANQLPSSVLKLL 686