Pairwise Alignments

Query, 390 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 274 a.a., Bacterial flagellin N-terminal helical region/Bacterial flagellin C-terminal helical region from Enterobacter asburiae PDN3

 Score =  188 bits (478), Expect = 1e-52
 Identities = 117/240 (48%), Positives = 152/240 (63%), Gaps = 21/240 (8%)

Query: 1   MTTINTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGL 60
           M  INTN+MS+T Q NL  + SSL T+++RLSSGLR+NSAKDDAAG AI+ RM +Q++G+
Sbjct: 1   MAVINTNLMSLTTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRMTSQIKGM 60

Query: 61  SVAARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRS 120
           + AARNANDGIS+AQTAEG+L ++ + LQR+RELAVQ++N +N++SD  +LQ EVT   +
Sbjct: 61  TQAARNANDGISMAQTAEGSLNEINNNLQRVRELAVQASNGTNSTSDLASLQDEVTARLA 120

Query: 121 EIDRVAKTTSFNGTKLLDGTFANA---TFQVGANAGEGIAID-SIVSANSTALGQLSATE 176
           EI+RVA  T FNG KLLDGT   A     QVG N G+ I +D S   A++T LG      
Sbjct: 121 EINRVAGKTDFNGIKLLDGTAGTAGKVKIQVGVNDGDTIDLDLSGAKADTTTLG------ 174

Query: 177 HFVAAVAAPSTAANAAIPAGTAGWSIKNAAGVDVALGGIGASTTAAQRTTQVVDAINAKS 236
                V A    A  A    T     K  A VD A  G+GA      R T  ++ +N  S
Sbjct: 175 -----VNAIDLKAMTATDLDTID---KAIAKVDTARSGLGA---VQNRFTSAINNLNNTS 223



 Score =  104 bits (260), Expect = 3e-27
 Identities = 67/179 (37%), Positives = 97/179 (54%), Gaps = 13/179 (7%)

Query: 219 TTAAQRTTQVVDAINAKSADTGVFARETGAGAYEIFSSRDLTAA-------TDFGAAFTA 271
           T +      + D + A+ A+    A +T     ++      TA         + G     
Sbjct: 102 TNSTSDLASLQDEVTARLAEINRVAGKTDFNGIKLLDGTAGTAGKVKIQVGVNDGDTIDL 161

Query: 272 AATGAPGDTAPPGTLTTLSAINVNSFGDAQKALQVIDKAINSINSSRADLGALQSRFENA 331
             +GA  DT      TTL    ++        L  IDKAI  ++++R+ LGA+Q+RF +A
Sbjct: 162 DLSGAKADT------TTLGVNAIDLKAMTATDLDTIDKAIAKVDTARSGLGAVQNRFTSA 215

Query: 332 VANIQITGENISAARGRIVDADFAKETSNLSRAQILQQAGTAMVAQANQAQQGVLSLLR 390
           + N+  T  N+SAA+ RI DAD+A E SN+SRAQILQQAGT++++QANQ  Q VLSLLR
Sbjct: 216 INNLNNTSNNLSAAQSRIQDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLLR 274