Pairwise Alignments

Query, 390 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 349 a.a., Flagellin 2 from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  233 bits (595), Expect = 5e-66
 Identities = 157/390 (40%), Positives = 222/390 (56%), Gaps = 49/390 (12%)

Query: 4   INTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGLSVA 63
           INTN +S+  Q N+    S+L+TS++RLSSGLR+NSAKDDAAG AI+ R  + ++GL+ A
Sbjct: 5   INTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQA 64

Query: 64  ARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRSEID 123
           ARNANDGISLAQTAEGAL ++ + LQR+REL VQ++  +N+ SD +++Q E+     EID
Sbjct: 65  ARNANDGISLAQTAEGALSEINNNLQRIRELTVQASTGTNSDSDLSSIQDEIKSRLDEID 124

Query: 124 RVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAIDSIVSANSTALGQLSATEHFVAAVA 183
           RV+  T FNG  +L     +   Q+GAN  + I+I  +   +ST L      + F  +  
Sbjct: 125 RVSGQTQFNGVNVLSKN-DSMKIQIGANDNQTISI-GLQQIDSTTLN----LKGFTVSGM 178

Query: 184 APSTAANAAIPAGT--AGWSIKNAAGVDVALGGIGASTTAAQRTT-QVVDAINAKSADTG 240
           A  +AA      GT  A   +K+A G  V L  +  + TA+  T   VVD+   K  +  
Sbjct: 179 ADFSAAKLTAADGTAIAAADVKDAGGKQVNL--LSYTDTASNSTKYAVVDSATGKYMEAT 236

Query: 241 VFARETGAGAYEIFSSRDLTAATDFGAAFTAAATGAPGDTAPPGTLTTLSAINVNSFGDA 300
           V    T              AA   GAA  A A      TA P                 
Sbjct: 237 VAITGT-------------AAAVTVGAAEVAGAA-----TADP----------------- 261

Query: 301 QKALQVIDKAINSINSSRADLGALQSRFENAVANIQITGENISAARGRIVDADFAKETSN 360
              L+ +D AI  ++  R+ LGA+Q+R ++AV N+  T  N+S A+ RI DAD+A E SN
Sbjct: 262 ---LKALDAAIAKVDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSN 318

Query: 361 LSRAQILQQAGTAMVAQANQAQQGVLSLLR 390
           +S+AQI+QQAG +++++ANQ  Q VLSLL+
Sbjct: 319 MSKAQIIQQAGNSVLSKANQVPQQVLSLLQ 348