Pairwise Alignments

Query, 734 a.a., General secretion pathway protein D from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 641 a.a., type II secretion system protein D from Enterobacter asburiae PDN3

 Score =  274 bits (701), Expect = 9e-78
 Identities = 216/682 (31%), Positives = 340/682 (49%), Gaps = 78/682 (11%)

Query: 51  NFVAAEIEAVARTMATITGRN----VVVDPRVKGTVNLVTERPVTPTAALNQFAAVLRLQ 106
           NF A+      R      GRN    ++VDP V+GTV++ T   +T       F +VL L 
Sbjct: 25  NFSASFKNTDVREFIDTVGRNLNKTILVDPSVQGTVSVRTYNVLTEDEYYQFFLSVLDLY 84

Query: 107 GFSLVD-TGGLYKIVPEADAKLQGNVVSAGSVSALPASNTVVTQIFRLNHESANNLVPVL 165
           G S++    G+ K+V  + A++ G  ++          + V+T++ R+ +     L P+L
Sbjct: 85  GLSVIPMDNGMVKVVRSSVARMSGAPIADSKNPG--KGDEVITRVVRMENVPVRELAPLL 142

Query: 166 RPL---IGPNNTINVNPGNNSLVITDYADNLQRIGRIIASLDVAGATDVEIIPLQHAVAA 222
           R L    G  N ++  P +N L++T  A  + R+  ++  +D +G    EI+PL+ A A 
Sbjct: 143 RQLNDASGIGNVVHFEP-SNVLLLTGKASVVNRLVDLVQRVDQSGVQRREIVPLRFASAK 201

Query: 223 DMAALVTRLIDPSTAGGAQADQSYKTTLVAEPRSNSLVLRAANPARLALVRSLVARLDQP 282
           +++ ++  L +    G  Q      T +VA+  +NSLV+  +  AR    R+L+++LD+ 
Sbjct: 202 ELSDMLNNLNNEEQKG--QNAPQLATKVVADDETNSLVISGSPDAR-QRTRTLISQLDRE 258

Query: 283 SSDKLSGNIHVVYLKNADAASLATTLRAALAGESSGGLSGSGGLGGSSATSPLNRAALTP 342
            +++  GN  V YLK A+A+ +   L     GE     +G    GG S  +P+       
Sbjct: 259 QNNE--GNTRVFYLKYANASKVVPVLTG--IGEQLKDKAG----GGKSKAAPI------- 303

Query: 343 TGTASANNNPSTAAVAASASPSTGGQIQADPATNSLIITAPEPQYRQLRAVIDQLDSRRA 402
                                +    I AD +TNSL+ITA       L  VID+LD RR 
Sbjct: 304 ---------------------AGDLNISADESTNSLVITAQPNVMNSLEKVIDKLDIRRP 342

Query: 403 QVYVESLIAEVNAEKAAEFGIQWQGALGSSGDRVIGLLGTNFGTGGRNILELAQGNATPS 462
           QV VE++IAEV      + G+QW    G          G  FG+ G   L ++Q   +  
Sbjct: 343 QVLVEAIIAEVQDGNGLDLGVQWTSKHG----------GVQFGSTG---LPISQIKKSKV 389

Query: 463 PGMNLGLARR-TNGVYVLGFLARFLQENGEGNVLSTPNLLTLDNEEAKIVIGQNVPFVTG 521
            G   GLA    NG +  G L   L  NG+ ++LSTP+++TLDN+EA   +GQ+VP ++G
Sbjct: 390 IGSYTGLATGFFNGDF--GALMTALSTNGKNDILSTPSVVTLDNKEASFNVGQDVPVLSG 447

Query: 522 QFTNTGSGGNNGSVNPFQTIERKDVGLTLRVKPQISENGTIKMTIYQEVSNV-VPSSVNS 580
             T +G        N F ++ERK VG  L++ PQI++   I + I QEVS+V   S+ ++
Sbjct: 448 SQTTSGD-------NVFNSVERKTVGTKLKIVPQINDGDMIHLKIEQEVSSVDNTSTADA 500

Query: 581 TTGLITNKRTIESTVLVEDGAVVVLGGLLQDEYAGNQEKVPGLGDVPIFGNLFRSETRSR 640
           + G   N RTI + V+V  G  VVLGGL+++    +  KVP LGD+P+ G LFR  ++  
Sbjct: 501 SLGPTFNTRTINNEVMVHSGQTVVLGGLMENVTKQSVSKVPLLGDIPVVGQLFRYTSQDS 560

Query: 641 KKTNLMVFLRPVVMRDGRETSSLALDRYELMRSVQKDAQPRQSSVLGVNEAPVMPPQLPP 700
            K NLMVF+   V+RD     + + ++YE +++ Q+  Q  +   LG+ E    P  + P
Sbjct: 561 AKRNLMVFIHTTVLRDDDNYGAASKEKYEQIQARQQ--QRMEEHKLGIVENADSP--MLP 616

Query: 701 RAPSPDGTAPVRSLADPQTAPP 722
             PS    APV + A   +  P
Sbjct: 617 AYPSQSRAAPVSASAPVSSRNP 638