Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  178 bits (451), Expect = 1e-49
 Identities = 107/280 (38%), Positives = 157/280 (56%), Gaps = 8/280 (2%)

Query: 12  MGQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAVL--TWMGLNYLELNFW 69
           + QL   L   S   IL+ GLA+IFGL +V+NF HGALFMLGA L  T+ GL     NFW
Sbjct: 9   IAQLANALALASLLTILASGLALIFGLRDVMNFGHGALFMLGAYLGYTFSGL----FNFW 64

Query: 70  VMIVLAPLLVGLLGVVIERLFLRWIYRLDHLYGLLLTLGLTLMLEGVLRSAYGVSGLPYS 129
             +V+ PLL+ LLGV+ E   +R + R  H+   L+T GL L+L  V+   +G + L  S
Sbjct: 65  AALVIVPLLLALLGVLFEYAAIRPLQRRSHMDVALVTFGLALILSQVVIKVWGTAPLSVS 124

Query: 130 AP--ISGATNLGFMVMPNYRGFVVLASLVVCFATWYVIEKTKLGAYLRAGTENPRLVEAF 187
           AP  ++G+ +L     P YR F++      C      ++ T+ G ++RA ++ P +    
Sbjct: 125 APPSLAGSLDLFGHAYPAYRIFLIAMGFGTCVLLAAWLKWTRSGMHVRAVSQQPMVARMM 184

Query: 188 GINVPLMVTLTYGFGVALAGLAGVLAAPIMQVSPLMGQNLIIIVFAVVVIGGMGSILGTI 247
           G+N   +  L    G   AGLAGVLA P + V P MG +++I    VVVIGG+GSI G I
Sbjct: 185 GVNTDRLSLLVVCLGTGFAGLAGVLAGPYLSVDPAMGASILISCLIVVVIGGLGSIGGAI 244

Query: 248 LTGLGLGIVEGLTKVFYPEASSTVVFVIMAIVLLIRPAGL 287
              +  G+++ +  +  P  +    ++++ IVLL RP GL
Sbjct: 245 AAAVVFGLIQVIGALISPTLAVMAPYMLLFIVLLWRPQGL 284