Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 286 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas fluorescens SBW25

 Score =  228 bits (580), Expect = 2e-64
 Identities = 115/285 (40%), Positives = 185/285 (64%), Gaps = 3/285 (1%)

Query: 8   LSALMGQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLNYLELN 67
           L+  + Q+L GL  G  Y ++++GL +IFGLLN +NFAHGA F+LGA + +  ++ L  N
Sbjct: 2   LNLYLFQILNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYICYTAVS-LTGN 60

Query: 68  FWVMIVLAPLLVGLLGVVIERLFLRWIYRLDHLYGLLLTLGLTLMLEGVLRSAYGVSGLP 127
           FW+ +++APL+V  L  VIERL ++ IY L H++ +L+TLG+ L+++      +G  G  
Sbjct: 61  FWLALLIAPLVVAALAWVIERLLIQRIYHLPHMFQILVTLGIALIIQEASVMIWGPVGKS 120

Query: 128 YSAP--ISGATNLGFMVMPNYRGFVVLASLVVCFATWYVIEKTKLGAYLRAGTENPRLVE 185
            + P  + G   +G  V P YR F+++ S +V    W ++E+T+ GA +RAG+E+   V 
Sbjct: 121 VAVPELLRGVLVVGDFVYPYYRLFLIVFSGLVGLGLWLLLERTRFGALVRAGSESTETVS 180

Query: 186 AFGINVPLMVTLTYGFGVALAGLAGVLAAPIMQVSPLMGQNLIIIVFAVVVIGGMGSILG 245
             G N+  + ++T+  GVALAG+AGVL AP+    P +G  ++ + F VVVIGGMGS  G
Sbjct: 181 LLGTNIFRLFSMTFALGVALAGVAGVLFAPLRGAQPFVGPEILGVAFVVVVIGGMGSFSG 240

Query: 246 TILTGLGLGIVEGLTKVFYPEASSTVVFVIMAIVLLIRPAGLFGK 290
            ++ GL +G+V+ L    +P+ +S +++  MA+V+L+RP GLFG+
Sbjct: 241 ALVGGLLVGVVQSLMTTLWPQGASLMIYGAMAVVILVRPYGLFGR 285