Pairwise Alignments

Query, 494 a.a., Aerotaxis sensor receptor protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 557 a.a., PAS domain-containing methyl-accepting chemotaxis protein from Paraburkholderia sabiae LMG 24235

 Score =  419 bits (1078), Expect = e-121
 Identities = 228/496 (45%), Positives = 313/496 (63%), Gaps = 4/496 (0%)

Query: 1   MSTTDTQSHITYANDAFVAVSGYSREEIESQPHNLVRHPDMPVEAFKDMWATLQGGEPWT 60
           +S TD +  I Y N AF+AVSGY+R+E+  +PHNL+RHPDMP EAF DMW T++ G PW+
Sbjct: 21  VSATDLKGKIQYCNPAFIAVSGYTRDELIGKPHNLIRHPDMPAEAFADMWTTIRAGRPWS 80

Query: 61  GLVKNRRENGDHYWVRANATPVKRDGVITGYMSVRTKPSQEEVASANALYAKFRNGQAGD 120
            LVKNRR+NGDHYWVRA+ TPV  +G   GY+SVR KP +E+V +A ALYAK R G A  
Sbjct: 81  ALVKNRRKNGDHYWVRASVTPVVENGTPVGYLSVRVKPDREQVRAAEALYAKMRTGDARG 140

Query: 121 LGFRKGLISRTGMMRWMSIMQAISAEARSNIGLSIATLLV---GTGAWHAGLAGTALAQF 177
           +   +G++ RTG++  + ++  +    R+ IG  +A +++   G  AW           F
Sbjct: 141 VRLHQGVVVRTGLLGKLGVLMRLPVAMRATIGYMVAPVVLLAAGLAAWGGTPPLPFWIAF 200

Query: 178 LALLTVSMLLASLWMRYQIYKPLAQLREHALRLATGDFHSATHMNRIDEIGMTMRAVGQL 237
                 S+  A L  R+ + +P+  +   A R+A GD  +   + R D++G  ++A+ QL
Sbjct: 201 GVTAATSVAAAQLLSRH-LGQPVDAMSSFATRMAAGDLTADLAIARHDDLGDVLQALNQL 259

Query: 238 GLMFRWVIDDVREQVLNAKIAASEIAQGNNDLSSRTEQAAASVEQTAASMEEMSAIVKNN 297
                 ++ DVR Q+     AA EI+ GN DL+ RTE  AAS+E+TAA+ME+++  V+ N
Sbjct: 260 KANLAAIVFDVRAQIGGMLDAAHEISSGNMDLARRTEMQAASLEETAATMEQLTTTVQAN 319

Query: 298 AETSQQAAKLSSSASEAADKGGRAVADVIHTMNDIAHSSNKIGDIIGVIDSIAFQTNILA 357
           A+ S +A  L   A  AA+ GG+    V  TM  I  +S +I DI GVID IAFQTNILA
Sbjct: 320 ADASVRALDLVRDAQSAAETGGKVAQQVEQTMAGITEASKRIADITGVIDGIAFQTNILA 379

Query: 358 LNAAVEAARAGAQGRGFAVVAAEVRSLAHRSAEAAKEIKSLIGASVEKVNAGSLMVDGAG 417
           LNAAVEAARAG  GR FAVVA EVR LA R A +AKEIK ++  +V +V  G+ +V    
Sbjct: 380 LNAAVEAARAGEAGRSFAVVAGEVRMLAQRCAASAKEIKQVVDTTVNEVAQGTELVGRTT 439

Query: 418 RTMKEIVVEVNRVSHMIAEISTATREQSDGITQVATAVGHLDQVTQQNAALVEQSTAASE 477
             M  I   V RVS +I E++ A+ EQ+DGI+QV  AV HLD  TQQNAALVEQ+ A ++
Sbjct: 440 AQMAVIDQAVQRVSSLIVEVANASSEQADGISQVNQAVSHLDSATQQNAALVEQAAATAQ 499

Query: 478 SLRTQMELLVKAVNVF 493
            L  Q ++L +AV +F
Sbjct: 500 RLAEQADVLDEAVRLF 515