Pairwise Alignments

Query, 299 a.a., ABC transporter permease subunit from Pectobacterium carotovorum WPP14

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  247 bits (630), Expect = 3e-70
 Identities = 134/302 (44%), Positives = 194/302 (64%), Gaps = 8/302 (2%)

Query: 5   PEPVVAVATLDEETIR-SPWRDFVQVFIRNPMALVSSGFVLLLVLVAIFAPWLAPWNPME 63
           P+ V   + +D+  +  SP+++F Q F RN  A++   F+ L+V  A+FAPW+AP +P E
Sbjct: 6   PKSVSPASPVDQSLLYPSPYKEFWQAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSE 65

Query: 64  PDWASLASPP---SAAHW---MGTDDLGRDVMSRIIYGARISLYIGIFSVTLGMLVGIVL 117
                L +PP       W   +GTD+LGRD++SR+I GAR+SL IG+ SV + ++ GI+L
Sbjct: 66  QYRDFLLTPPVWLEGGTWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILL 125

Query: 118 GLLAGYYGRWVDTLIMRGSDVLFAFPGMLLAIAVVAILGPGLNNVIIAVAVFSVPVFARI 177
           GLLAG++ + +   IMR  DV+ A P +LLA+A+VAILGPGL N +IA+A+ S+P + R+
Sbjct: 126 GLLAGFFPQLLGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRL 185

Query: 178 VRASTLSLKQAAYVEAVRCAGAPDRIVLMRHILPGTLPNVIVYFTMRIGTSILTAAGLSF 237
            RA+ +      YV A R AGA    ++   +LP  +  +IV  T+   ++IL AA L F
Sbjct: 186 TRAAVMGELNRDYVTAARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGF 245

Query: 238 IGLGPEPDVPEWGNILAMSRSLMMAGAWHVSVFPGLAIFFTVLAFNLLGDALRDTLDPKL 297
           +GLG +P  PEWG +LA +R  +    W VS+ PGL I  +VLA NL+GD LRD LDPKL
Sbjct: 246 LGLGVQPPTPEWGTMLASARDYIERAWWVVSL-PGLTILLSVLAINLMGDGLRDALDPKL 304

Query: 298 KS 299
           K+
Sbjct: 305 KN 306