Pairwise Alignments

Query, 371 a.a., LPS export ABC transporter permease LptF from Pectobacterium carotovorum WPP14

Subject, 372 a.a., permease from Pseudomonas simiae WCS417

 Score =  199 bits (506), Expect = 1e-55
 Identities = 116/371 (31%), Positives = 199/371 (53%), Gaps = 5/371 (1%)

Query: 1   MIIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMV 60
           MI+ RYL RE   +  A+  +LL+I    + V+ L  A  G +    +  ++G  +P  +
Sbjct: 1   MIVFRYLSREVLLTLSAVSAVLLVIIMSGRFVKYLAQAASGALDPGSLFLIMGFRLPGFL 60

Query: 61  QLILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWL 120
           QLILPL LFLG+L+ +GRLY ESE+TV+ A G+ ++ LL   ++ A   A++     + L
Sbjct: 61  QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAAGVALIVAWLSLGL 120

Query: 121 SPWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFVGNVKG--SEFEHVFLAQLR 178
           +P  +   + VL +  A     TL  G+FQ+   G+ V +   +    +    VF+++ R
Sbjct: 121 APQGAMQFQLVLNKQDAMTEFDTLEPGRFQALNDGSRVTYTETMTDDRANLGGVFISEKR 180

Query: 179 PSGNARP---SVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIG 235
              + +    SV+VAD G  +   DG++ + L+NG RY+G+  + D+R   +  Y  ++ 
Sbjct: 181 LGQDKKDRGISVLVADSGRQEVRPDGSRYLILENGYRYDGSPGMADYRAIKYDTYGVMLA 240

Query: 236 HQSVTLNNSDVQQMDMQTLWHSDAHDARAEFHWRLTLIISVLIMAMMVVPLSVVNPRQGR 295
              ++   +D   +    L+ S    + AE  WR++L + V I+ +M VPLS VNPRQGR
Sbjct: 241 RPDISDEVTDRDAIPTTELFGSKELRSIAELQWRISLPLLVFIVTLMAVPLSRVNPRQGR 300

Query: 296 VLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLTYFGIAVMLNLWDTVPMRK 355
            L +LPA+LLY+ +  +  S R +  KGK+ P + +W  +  +  I + L  W+ + ++ 
Sbjct: 301 FLKLLPAILLYMAYLTILISARGSLEKGKLSPTLGLWWVHGIFLVIGLGLLYWEPIRLKM 360

Query: 356 VRARFKPRILR 366
              R +  + R
Sbjct: 361 KSRRGQKELAR 371