Pairwise Alignments

Query, 371 a.a., LPS export ABC transporter permease LptF from Pectobacterium carotovorum WPP14

Subject, 371 a.a., Permease YjgP/YjgQ family protein from Pseudomonas putida KT2440

 Score =  201 bits (510), Expect = 3e-56
 Identities = 113/365 (30%), Positives = 197/365 (53%), Gaps = 6/365 (1%)

Query: 1   MIIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMV 60
           MI+ RYL RE   +  A+  +LL+I    + ++ L  A  G +   ++  ++G  +P  +
Sbjct: 1   MIVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFL 60

Query: 61  QLILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWL 120
           QLILPL LFLG+L+ +GRLY ESE+TV+ A G+ ++ LL   +  A   A++     + L
Sbjct: 61  QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSL 120

Query: 121 SPWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFVGNVKGSEFE--HVFLAQLR 178
           +P      ++++++  A     TLV G+FQ+ + G+ V +   +         VF+++ R
Sbjct: 121 APLGVAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLGGVFISEKR 180

Query: 179 ----PSGNARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVI 234
                + +  PSV+VA++GH +   DG + + L+NG RY+G     D+R   +  Y  ++
Sbjct: 181 FNQDKTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLL 240

Query: 235 GHQSVTLNNSDVQQMDMQTLWHSDAHDARAEFHWRLTLIISVLIMAMMVVPLSVVNPRQG 294
               V    ++ + +    L   +    RAE  WRL+L I V ++ ++ VPLS VNPRQG
Sbjct: 241 PKPEVAEEVTEREALPTSELIGKEGLRERAELQWRLSLPILVFVVTLLAVPLSRVNPRQG 300

Query: 295 RVLSMLPAMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLTNLTYFGIAVMLNLWDTVPMR 354
           R L +LPA+LLY+ +  +  S+R    KGK+   + +W  +  +  I + L  W+ + ++
Sbjct: 301 RFLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVHGLFLLIGLGLMYWEPLRLK 360

Query: 355 KVRAR 359
           +   R
Sbjct: 361 RAARR 365