Pairwise Alignments

Query, 371 a.a., LPS export ABC transporter permease LptF from Pectobacterium carotovorum WPP14

Subject, 373 a.a., FIG000988: Predicted permease from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  107 bits (266), Expect = 7e-28
 Identities = 77/325 (23%), Positives = 152/325 (46%), Gaps = 14/325 (4%)

Query: 4   IRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQLI 63
           IR  +  +F + L +LF ++L      L+R LG A  G +    +  +LG  V   +  I
Sbjct: 7   IRKELARSFGATLVVLFTIVLTML---LIRTLGLASRGSVDPQEIALVLGYTVIGRMPTI 63

Query: 64  LPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWLSPW 123
           L L+LF+ ++ T  R+Y +SE+ +  + G      L+  +  +    +V T+ V ++ PW
Sbjct: 64  LTLALFIAIVFTLSRMYRDSEMIIWFSSGRSLGGFLRPVMRFSWPILVVITVMVFFVWPW 123

Query: 124 SSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFV--GNVKGSEFEHVFLAQLRPSG 181
           ++   +++    +    +  +  GQFQ +  G  V F+      G+E  ++F++     G
Sbjct: 124 ANAQTDQLRDRFERRGDLERVAPGQFQESSSGRRVFFIDKDTADGTEGRNIFISSTENDG 183

Query: 182 NARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQSVTL 241
             R +V  A  G I+   +  Q + L+NG R E  A   + ++++F  Y   IG  +++ 
Sbjct: 184 --RETVTSARSGRIEWLNE-QQFLMLNNGQRLETPADQSNLKVSEFEEYGTQIGVSAISQ 240

Query: 242 NNSDVQQMDMQTLWHSDAHDARA---EFHWRLTLIISVLIMAMMVVPLSVVNPRQGRVLS 298
                + +  +T W       RA   E  WR+ + ++ L   ++ V  +  NPR GR  +
Sbjct: 241 RG---EALKARTSWDLIRDPTRANLGELGWRIGMALTALNFVLIAVATTTGNPRAGRGGN 297

Query: 299 MLPAMLLYLIFFLLQSSLRSNASKG 323
           +   +  ++ ++ L +  +S  + G
Sbjct: 298 LFFTLFAFVFYYNLLNLGQSWVASG 322