Pairwise Alignments

Query, 371 a.a., LPS export ABC transporter permease LptF from Pectobacterium carotovorum WPP14

Subject, 356 a.a., hypothetical protein from Escherichia coli BL21

 Score =  101 bits (252), Expect = 3e-26
 Identities = 85/345 (24%), Positives = 156/345 (45%), Gaps = 4/345 (1%)

Query: 2   IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQ 61
           ++  Y++R T +  L I+  L+ IF      R L  A +G +  ++V+ ++   V   ++
Sbjct: 3   LVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIALE 62

Query: 62  LILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWLS 121
           ++LP+ L++ V +T G++Y +SEIT + A G     L KA L LA+  +I  T+  M+  
Sbjct: 63  MLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMYGR 122

Query: 122 PWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAVLFVGNVKGSEFEHVFLAQLRPSG 181
           PW+     ++  ++++   +  L   +F +   G  +L        +   +  A +  S 
Sbjct: 123 PWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMIL--SQTVDQDNNRLTDALIYTST 180

Query: 182 NARPSVVVADRGHIKQNEDGAQVVTLDNGSRYEGTALLRDFRITDFTNYQAVIGHQSVTL 241
             R  +  A    +         V L NG+ Y      RD     + N Q  +     + 
Sbjct: 181 ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLIDHQGRDDNEQIYRNLQLHLNPLDQS- 239

Query: 242 NNSDVQQMDMQTLWHSDAHDARAEFHWRLTLIISVLIMAMMVVPLSVVNPRQGRVLSMLP 301
            N   +   +  L  S      AE  WR +  ++ L+MA++ + LS V PRQGR  ++LP
Sbjct: 240 PNVKRKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPRQGRFSTLLP 299

Query: 302 AMLLYLIFFLLQSSLRSNASKGKIDPMVWVWLT-NLTYFGIAVML 345
             LL++  F      R+  + G I  +  +WL   L   G+ +++
Sbjct: 300 LTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLV 344