Pairwise Alignments

Query, 371 a.a., LPS export ABC transporter permease LptF from Pectobacterium carotovorum WPP14

Subject, 389 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 57.4 bits (137), Expect = 7e-13
 Identities = 42/215 (19%), Positives = 100/215 (46%), Gaps = 13/215 (6%)

Query: 2   IIIRYLVRETFKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVISLLGLGVPEMVQ 61
           ++  Y++R T +  L  L  +L I +  ++++ +    D        ++L  + +P ++ 
Sbjct: 3   LLENYILRRTTQMFLVALLPVLAIIWTIQVLQRINLVTDTGQSMGSFMALATMILPTLIP 62

Query: 62  LILPLSLFLGVLMTFGRLYAESEITVMHACGLGKRVLLKAALVLAVFTAIVATINVMWLS 121
           ++LP +L +G+   F  +  +SE+ ++ A G  + V+ +  L+LA   ++ +     ++ 
Sbjct: 63  VVLPFALVIGITQIFTTMNNDSELAIIDAAGAPRSVMYRPVLILAAVLSLFSFTITNFIE 122

Query: 122 PWSSRHQEEVLAEAKANPGMATLVEGQFQSAQGGNAV------------LFVGNVKGSEF 169
           P +     +++A A A+   + + E  F++ Q G  V            LFV + +   F
Sbjct: 123 PPARNSARQMVAAAYADLLSSVIEEKTFRTIQDGLYVQIAQRQGRILKGLFVADRRDPNF 182

Query: 170 EHVFLAQLRPSGNARPSVVVADRGHIKQNEDGAQV 204
           + ++ A+      +  S+ + D G ++Q     +V
Sbjct: 183 DLIYYAKEGMIDESGTSLTMRD-GEVQQKTPDGKV 216