Pairwise Alignments

Query, 320 a.a., sugar-binding transcriptional regulator from Pectobacterium carotovorum WPP14

Subject, 319 a.a., LsrR, transcriptional repressor of lsr operon from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  103 bits (256), Expect = 7e-27
 Identities = 85/320 (26%), Positives = 154/320 (48%), Gaps = 22/320 (6%)

Query: 6   GSQESELLTEIAVAYYQDEITQEEIAKKFGISRIKVGRLLKRAKEEGIVEITVRYHPVFS 65
           G  E E +  IA  YY D +TQ EI+++ G++R+KV RLL++  + GI+ + +       
Sbjct: 11  GMCEEEQVARIAWFYYHDGLTQSEISERLGLTRLKVSRLLEKGHQSGIIRVQINSRFEGC 70

Query: 66  TRLEQQMLERFSIK--RALIALDHQDEEEQRRQVAALVSNYLALSLKDDTVVAVGQGRNV 123
              E  +   F+++  R L AL   D      ++    ++ L  SL+   ++AVG G   
Sbjct: 71  LEYENALRNHFALQNIRVLPALPDAD---IGLRLGIGAAHMLMESLRPQQLLAVGFGEAT 127

Query: 124 AAVADHVSN-VTERNCRFICGIGGTHRPGDAINADHISRRLAKKFGGSSETLYSPAYVEN 182
                 +S  ++ +  R +   GG           +++         S   + +P    +
Sbjct: 128 MTTLKRLSGFISAQQIRLVTLSGGV--------GPYMTGIGQLDAACSVSIMPAPLRASS 179

Query: 183 RALKEAFMQNGTIKETLDRARKADIALVGIGDMN--ENSYMVKLGWFTPHEIIDASLNQG 240
           + +        ++++ +  A+ AD A+VGIG +N  + + ++K G+ T  E +     +G
Sbjct: 180 QEIACTLRNENSVRDVMLTAQAADAAIVGIGAINQKDQASILKSGYITQGEQLMIG-RKG 238

Query: 241 VIGDIAGYDFFNAQGQHV-DTVMNERVIGVSIEELHKIPCVIAIASENTKALAILGALRT 299
            +GDI GY FF+A G+ + D  ++  +IG+ +  L  IP VI +A    KA AI+ A+R 
Sbjct: 239 AVGDILGY-FFDAHGEIIPDIKIHNELIGLKLNSLSTIPTVIGVAGGEQKAEAIIAAMRG 297

Query: 300 GAIDIIAT---SAGNIRTIL 316
             I+ + T   +AG I  I+
Sbjct: 298 NYINALVTDQKTAGKIIQII 317