Pairwise Alignments

Query, 419 a.a., integrase arm-type DNA-binding domain-containing protein from Pectobacterium carotovorum WPP14

Subject, 396 a.a., putative integrase from Escherichia coli BL21

 Score =  441 bits (1134), Expect = e-128
 Identities = 211/390 (54%), Positives = 287/390 (73%), Gaps = 1/390 (0%)

Query: 25  LYLTVSPSGAKLWYFRYRFCGKENRLAFGPYPQTTLAEAREKRDAARKLLASGISPSQLR 84
           ++L V P+G+K W  +YR+ GK+  LA G YP+ TLA+AR +RD  RKLLA+G+ P   +
Sbjct: 1   MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK 60

Query: 85  KSNNPAVDESRTFQSVALAWHTSSLKLWSDTHADKILTCLKRYVFPAIGAMDIAQVETRH 144
           K++     ++RTF+ VA+ WH ++ K WS+ HA ++L  L+  +F A+G  +IA+++TR 
Sbjct: 61  KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119

Query: 145 LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPVATQHHPAL 204
           L   +KA++  G  +VA R++Q  T IMR+AVQ G+I YNPA ++ G V     QH PAL
Sbjct: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179

Query: 205 PLKLLPELLEKMENYKGRMLTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQRE 264
            LK +PELL K+++Y GR LTR A+EL L +F+RSSELRFARW E + +A IW++P +RE
Sbjct: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239

Query: 265 AVNGVRFSERGAKMKDEHLVPLSRQAVALLKQIQAISGESVFVFPGAHTLNKPMSENTIN 324
            + GV+ S RG+KM+  HLVPLS QA+A+LKQI+   G    +F G H  +KPMSENT+N
Sbjct: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299

Query: 325 KALRVIGYDTKTEVCGHGFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEH 384
            ALRV+GYDTK EVCGHGFRTMACS+L ESG WS+DA+ERQMSH  RN VRAAY+HKAEH
Sbjct: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359

Query: 385 LEARIEMMQWWSDYLDVNREGYVAPYIYAR 414
           LE R  M+QWW+D+LDVNRE +++P+ YA+
Sbjct: 360 LEERRLMLQWWADFLDVNRERFISPFEYAK 389