Pairwise Alignments

Query, 311 a.a., ABC transporter permease from Pectobacterium carotovorum WPP14

Subject, 299 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  192 bits (489), Expect = 6e-54
 Identities = 108/306 (35%), Positives = 172/306 (56%), Gaps = 12/306 (3%)

Query: 1   MNHLSPENLTPKKATADGVSSAPTHPLKTPFRLSPEVRAFIRNPAGMAGLLLLITVFLMA 60
           M  ++  N  P+++    +S+     L+   +L+ E       P GM G  +L  + L+A
Sbjct: 1   MTDITHTNPVPRRSALSRLSTTTGRTLR---KLADE-------PLGMFGFAILAILVLVA 50

Query: 61  ALAPLLYPGDPLDMVAQPFLWPGENPDFPLGTDSMGRDVAAGIVHGSQVSLQIGFSAVIV 120
             APL+ P DP   V +  L P        GTD  GRD+ + +V+G+++++Q   S  I+
Sbjct: 51  VFAPLIAPFDPASQVLENALQPPSWAHLA-GTDEFGRDIFSRLVYGTRITIQTVLSVSII 109

Query: 121 SLLIGTVVGALAGYFGGRVDDLLVHITELFQTFPTFLLVVVLVAIGSPSVTLISLAIGIA 180
              IG  +G +AG+FGGR D +L+  T++  +FP+ +L +   A     +    +AI + 
Sbjct: 110 VGPIGLAIGVMAGFFGGRTDAILMRATDIVLSFPSLVLALAFAAAMGAGLGTAIIAISLT 169

Query: 181 SWPTIARLVRAEFRSLRESDFVLAARSQGFSSLRIIFQEMLPNALPSIIVTTSVMVASAI 240
           +WP IARL RAE   +R +D+V AAR  G S LRI+F  + P  +PS+IV  ++ +A  I
Sbjct: 170 AWPPIARLARAEALVVRNTDYVAAARLYGASPLRILFLYIAPMCIPSVIVRLTLNMAGII 229

Query: 241 LIESALSFLGFG-DPNRVSWGSMIGAGRESLRTAWFLTALPGTALVLTVLSLNLVGDALN 299
           L  ++L FLG G  P    WG+MI +GR+ +   W++  +PG A++LT L+ N+ GD L 
Sbjct: 230 LTAASLGFLGLGAQPPLPEWGAMISSGRKFMLDYWWVAVMPGIAILLTSLAFNIAGDTLR 289

Query: 300 DALNPR 305
           D L+PR
Sbjct: 290 DLLDPR 295