Pairwise Alignments

Query, 311 a.a., ABC transporter permease from Pectobacterium carotovorum WPP14

Subject, 296 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  213 bits (542), Expect = 4e-60
 Identities = 112/270 (41%), Positives = 169/270 (62%), Gaps = 1/270 (0%)

Query: 37  VRAFIRNPAGMAGLLLLITVFLMAALAPLLYPGDPLDMVAQPFLWPGENPDFPLGTDSMG 96
           +R F R+   + G+++++ +     + P L P D L +  +    P        GTD +G
Sbjct: 23  LRRFARHKLAVLGVIMIMIMIFACVVGPYLLPYDELFIDLRARFAPPLTGYHIFGTDPLG 82

Query: 97  RDVAAGIVHGSQVSLQIGFSAVIVSLLIGTVVGALAGYFGGRVDDLLVHITELFQTFPTF 156
           RD+AA + +  ++SL +GF A+++S LIGTV+G +AGY+GGR+  +L+   + F +FP+ 
Sbjct: 83  RDIAARLFNAGRISLLVGFFAMVLSTLIGTVIGVVAGYYGGRIGAILMRFVDAFLSFPSI 142

Query: 157 LLVVVLVAIGSPSVTLISLAIGIASWPTIARLVRAEFRSLRESDFVLAARSQGFSSLRII 216
            L++ L A   PS  +I+L I + SW  IARLV AE RSLRE DFV+AAR  G  +  I+
Sbjct: 143 FLLLALAAFVKPSPFMITLIIAVTSWMEIARLVEAEVRSLRERDFVMAARMLGLPNGWIM 202

Query: 217 FQEMLPNALPSIIVTTSVMVASAILIESALSFLGFG-DPNRVSWGSMIGAGRESLRTAWF 275
           F+E+LPNA+  IIV  ++ VA AIL+E+ +SFLG+G  P   SWG+M+   ++ L  A +
Sbjct: 203 FRELLPNAIGPIIVAATLTVARAILLEAYISFLGYGIQPPLPSWGNMLNGAQQYLDKAPW 262

Query: 276 LTALPGTALVLTVLSLNLVGDALNDALNPR 305
           L  +PG A+ L V S N +GD L DAL+ R
Sbjct: 263 LAIIPGVAITLAVTSFNFIGDGLRDALDAR 292