Pairwise Alignments

Query, 311 a.a., ABC transporter permease from Pectobacterium carotovorum WPP14

Subject, 300 a.a., ABC transporter, membrane spanning protein (dipeptide) from Agrobacterium fabrum C58

 Score =  183 bits (465), Expect = 4e-51
 Identities = 97/265 (36%), Positives = 154/265 (58%), Gaps = 4/265 (1%)

Query: 43  NPAGMAGLLLLITVFLMAALAPLLYPGDPLDM-VAQPFLWPGENPDFPLGTDSMGRDVAA 101
           NP  + GL +++    ++ LAP + P DP    +     +P  N +   GTD +GRD+ +
Sbjct: 36  NPLAVIGLTIIVLFIALSLLAPAIAPYDPATQNLGNRLAFP--NAEHWFGTDELGRDILS 93

Query: 102 GIVHGSQVSLQIGFSAVIVSLLIGTVVGALAGYFGGRVDDLLVHITELFQTFPTFLLVVV 161
            I++G +V+L +  + V++   IG  +G +AGYFGG VD +L+ +T++F  FP  +L + 
Sbjct: 94  RILYGGRVTLGMVIAVVVLVAPIGLAIGCIAGYFGGIVDTVLMRVTDVFLAFPRLILALA 153

Query: 162 LVAIGSPSVTLISLAIGIASWPTIARLVRAEFRSLRESDFVLAARSQGFSSLRIIFQEML 221
            VA   P V    LAI + +WP  ARL RAE  ++R SDFV A R  G S+ RII + + 
Sbjct: 154 FVAALKPGVESAILAIALTAWPPYARLARAETMTVRGSDFVAAYRLTGASAWRIIARHIA 213

Query: 222 PNALPSIIVTTSVMVASAILIESALSFLGFG-DPNRVSWGSMIGAGRESLRTAWFLTALP 280
           P  +PS+IV  ++ ++S I+  ++L FLG G  P    WG+MI   +  +   W++  +P
Sbjct: 214 PLCVPSLIVRITLDMSSIIITAASLGFLGMGAQPPSPEWGAMIATAKRFIFEQWWVATIP 273

Query: 281 GTALVLTVLSLNLVGDALNDALNPR 305
           G A+ L  L+ N +GD L D L+P+
Sbjct: 274 GIAIFLVSLAFNFLGDGLRDVLDPK 298