Pairwise Alignments

Query, 1160 a.a., DNA polymerase III subunit alpha from Pectobacterium carotovorum WPP14

Subject, 1160 a.a., DNA polymerase III subunit alpha (NCBI) from Escherichia coli BW25113

 Score = 2094 bits (5425), Expect = 0.0
 Identities = 1033/1160 (89%), Positives = 1089/1160 (93%)

Query: 1    MAEPRFVHLRVHSDYSMIDGLAKVGPLVKKAAALGMPALAITDFTNLCGLVKFYGGAHGA 60
            M+EPRFVHLRVHSDYSMIDGLAK  PLVKKAAALGMPALAITDFTNLCGLVKFYG  HGA
Sbjct: 1    MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA 60

Query: 61   GIKPIIGADFCVESDELGDELAHLTVLAMNNAGYQNLTLLISHAYQRGYGAAGPTIDRDW 120
            GIKPI+GADF V+ D LGDEL HLTVLA NN GYQNLTLLIS AYQRGYGAAGP IDRDW
Sbjct: 61   GIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIDRDW 120

Query: 121  LIEHQEGLILLSGGRRGDVGRFLLRGNQAQAEQCLAFYQEHFPQRYYLELIRTSRPDEES 180
            LIE  EGLILLSGGR GDVGR LLRGN A  ++C+AFY+EHFP RY+LELIRT RPDEES
Sbjct: 121  LIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEES 180

Query: 181  YLHAAVELATKHGIPVVATNEVCFISTDDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM 240
            YLHAAVELA   G+PVVATN+V FI + DFDAHEIRVAIHDG+TLDDPKRPRNYSPQQYM
Sbjct: 181  YLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM 240

Query: 241  RSEEEMCELFADIPEALANSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLVQCSKKGL 300
            RSEEEMCELFADIPEALAN+VEIAKRCNVT+RLGEYFLPQFPTGDMSTED+LV+ +K+GL
Sbjct: 241  RSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAKEGL 300

Query: 301  EERLEFLFPDPEVRAERRPEYDERLDIELGVINQMGFPGYFLIVMEFIQWSKDNDVPVGP 360
            EERL FLFPD E R +RRPEYDERL+ EL VINQMGFPGYFLIVMEFIQWSKDN VPVGP
Sbjct: 301  EERLAFLFPDEEERLKRRPEYDERLETELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP 360

Query: 361  GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDKVIDHVAE 420
            GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRD+VI+HVA+
Sbjct: 361  GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD 420

Query: 421  MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ 480
            MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKL+PPDPGMTL KAF AEPQ
Sbjct: 421  MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ 480

Query: 481  LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDAEGNHPVTQ 540
            LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVI+PTKITDFAPLYCD EG HPVTQ
Sbjct: 481  LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ 540

Query: 541  FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINARRAKQGLEPIDIAAIPLEDKKSFDML 600
            FDK+DVEYAGLVKFDFLGLRTLTII+WAL MIN RRAK G  P+DIAAIPL+DKKSFDML
Sbjct: 541  FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDML 600

Query: 601  QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA 660
            QRSETTAVFQLESRGMKDLIKRL+PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGRE 
Sbjct: 601  QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE 660

Query: 661  ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPVEM 720
            ISYPD++WQHESLKPVLEPTYGIILYQEQVMQIAQVL+GYTLGGADMLRRAMGKK P EM
Sbjct: 661  ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM 720

Query: 721  AKQRGGFEDGAKSRGVNGELAVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA 780
            AKQR  F +GA+  G+N ELA+KIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
Sbjct: 721  AKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA 780

Query: 781  EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG 840
            EFMAAVMTADMDNT+KVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
Sbjct: 781  EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG 840

Query: 841  VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN 900
            VGEGPIEAIIEARN+GGYFRELFDLCARTD KKLNRRVLEKLIMSGAFDRLGPHRAALMN
Sbjct: 841  VGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN 900

Query: 901  SLPDALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYSTVPPWPEQVVLDGERETLGLY 960
            SL DALKAADQHAKAEAIGQ DMFGVLA+ PEQ+EQSY++  PWPEQVVLDGERETLGLY
Sbjct: 901  SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY 960

Query: 961  LTGHPITQYIKEIERYAGGVRLKDMHPTDRGKMTTAVGLVLAARVMVTKRGNRIGVCTLD 1020
            LTGHPI QY+KEIERY GGVRLKDMHPT+RGK+ TA GLV+AARVMVTKRGNRIG+CTLD
Sbjct: 961  LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLD 1020

Query: 1021 DRSGRLEIMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTVRELMDISEAREKY 1080
            DRSGRLE+MLFTDAL+KYQ LLEKDRILI SGQVSFDDFSGGLKMT RE+MDI EAREKY
Sbjct: 1021 DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY 1080

Query: 1081 ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARARLRFGAAWRVTPAD 1140
            ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQR DARARLRFGA WRV+P+D
Sbjct: 1081 ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD 1140

Query: 1141 ALLNELRTLVGNEQVELEFD 1160
             LLN+LR L+G+EQVELEFD
Sbjct: 1141 RLLNDLRGLIGSEQVELEFD 1160