Pairwise Alignments

Query, 139 a.a., transcription antitermination factor NusB from Pectobacterium carotovorum WPP14

Subject, 166 a.a., antitermination protein NusB from Pseudomonas simiae WCS417

 Score =  125 bits (315), Expect = 2e-34
 Identities = 64/137 (46%), Positives = 88/137 (64%)

Query: 2   KPAARRRARECAVQALYSWQLSKNDIADVEHQFLSEQDVKDVDITYFRELLAGVATQAEK 61
           K   RR AR+ A QALY   L+   + ++E QF  + D    D+ YF ++L GV     +
Sbjct: 24  KNEKRRAARQLATQALYQRHLAGASLNEIEAQFRVDNDFTFADLPYFHDILHGVHAHLTE 83

Query: 62  LDQLMAPFLSRQIEELGQVEKAILRLAMFELSKREDVPYKVAINEAIELAKIFGAEDSHK 121
           +D  +AP L   IEEL  VE  ++RL+ +EL  R DVPY+V INE IELAK++G+ D HK
Sbjct: 84  IDTALAPCLDLTIEELDPVELCVMRLSAWELLYRVDVPYRVVINEGIELAKVYGSTDGHK 143

Query: 122 FVNGVLDKVAPSVRKGK 138
           FVNGVLDK+AP +R+ +
Sbjct: 144 FVNGVLDKLAPRLREAE 160