Pairwise Alignments

Query, 139 a.a., transcription antitermination factor NusB from Pectobacterium carotovorum WPP14

Subject, 165 a.a., Putative transcription antitermination protein NusB from Agrobacterium fabrum C58

 Score = 76.3 bits (186), Expect = 2e-19
 Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 11/146 (7%)

Query: 1   MKPAARR-RARECAVQALYSWQLSKNDIADVEHQFLSEQDVKDVD--------ITYFREL 51
           +KPA +R  AR  AVQALY   +    + +V  ++ + +  ++VD         ++FR +
Sbjct: 15  VKPANQRGAARLAAVQALYQMDVGGTGVMEVVAEYEAHRLGQEVDGDTYLKADPSWFRSI 74

Query: 52  LAGVATQAEKLDQLMAPFLSRQ--IEELGQVEKAILRLAMFELSKREDVPYKVAINEAIE 109
           ++GV     K+D L+   L     +  L    +AILR   FE+ +R+DVP  V + E +E
Sbjct: 75  VSGVVRDQTKIDPLVRSALLEDWPLSRLDATVRAILRAGTFEILERKDVPVAVIVTEYVE 134

Query: 110 LAKIFGAEDSHKFVNGVLDKVAPSVR 135
           +A+ F   D  K VN VLD++A  VR
Sbjct: 135 IARAFFEHDEPKLVNAVLDRIAKQVR 160