Pairwise Alignments

Query, 879 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Pectobacterium carotovorum WPP14

Subject, 884 a.a., DNA gyrase subunit A from Pseudomonas simiae WCS417

 Score = 1171 bits (3030), Expect = 0.0
 Identities = 590/885 (66%), Positives = 731/885 (82%), Gaps = 7/885 (0%)

Query: 1   MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
           M +LA+EI PVNIE+ELK SYLDYAMSVIVGRALPD RDGLKPVHRRVL+AMS LGNDWN
Sbjct: 1   MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN 60

Query: 61  KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           KPYKKSARVVGDVIGKYHPHGD+AVY+TIVRMAQPFSLRY+LVDGQGNFGS+DGD+AAAM
Sbjct: 61  KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM 120

Query: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
           RYTE+RM+K+AHELLADL KETVD+VPNYDGTE IP VMPT+IPNLLVNGSSGIAVGMAT
Sbjct: 121 RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT 180

Query: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
           NIPPHNL EV++GCLA ID+  ++++ LM++I GPDFPTAAIINGR GI EAYRTGRG+I
Sbjct: 181 NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI 240

Query: 241 YIRARAEVE-ADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKD 299
           Y+RAR+ +E  D   GR+ I++ E+PYQ+NKARLIEKIAELVK+K++EGI+ LRDESDKD
Sbjct: 241 YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD 300

Query: 300 GMRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRR 359
           GMR+VIE++R  V EV+LNNLY+QTQLQ+ FGIN+VAL  G+P+I+ LKD+L AFVRHRR
Sbjct: 301 GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR 360

Query: 360 EVVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGS 419
           EVVTRRT+FELRKAR+R HILEG A+AL+NIDP+I LI+ + +P+EAK +LI+  WE  +
Sbjct: 361 EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA 420

Query: 420 VATMLERAGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYK 479
           V  M+ERAG D+ RPE L+P++G+R+G+Y+L+ +QAQAIL+LRL +LTG+EHEKLL EY+
Sbjct: 421 VVAMVERAGADSCRPETLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ 480

Query: 480 ELLAEIAELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANTADINIEDLINQEDV 539
           E+L +I EL+ IL+S  RLMEVIREELE I+ +Y D RRTEI     D+ + D+I +E+ 
Sbjct: 481 EILNQIGELIRILSSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER 540

Query: 540 VVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRL 599
           VVT+SH GY K QPL+ Y+AQRRGGKGKSA  +K+ED+I  LLVAN+H T+L FSS+G++
Sbjct: 541 VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV 600

Query: 600 YWMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHIFMATASGTVKKTA 659
           YW+K Y++PEASR ARGRP+VNLLPL++DE IT +LPV EY EG  IFMATA GTVKKT 
Sbjct: 601 YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVEEYTEGHFIFMATAKGTVKKTP 660

Query: 660 LTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSMGRTAT 719
           L  FSR RS G+IA+ L+EGD LI   +TDG  E MLFS  GKV RF E  VR+MGRTA 
Sbjct: 661 LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR 720

Query: 720 GVRGINLQGEDRVVSLIIPRGEGDILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSER 779
           GVRG+ L    +++S++IP     ILT ++ G+GKRTA+SE+P   R  +GVI++  ++R
Sbjct: 721 GVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNDR 780

Query: 780 NGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEHVVGLQRV 839
           NG++VGAVQV   ++IM+I+D GTLVRTRV+EVS +GRNTQGVTLI+ A+DE +VGL+RV
Sbjct: 781 NGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAKDEKLVGLERV 840

Query: 840 AEP--VEDEELDGVVKVEGEV-AEDDDAIDD--IDGDDDIAEDDE 879
            EP  VE EEL+G  + EGEV A  DD +D+  +D   D  E  E
Sbjct: 841 QEPSEVEGEELEG-EEFEGEVIAAGDDNVDEPTLDAAADEEEPQE 884