Pairwise Alignments

Query, 879 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Pectobacterium carotovorum WPP14

Subject, 883 a.a., DNA gyrase subunit A (EC 5.99.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 1013 bits (2618), Expect = 0.0
 Identities = 518/884 (58%), Positives = 656/884 (74%), Gaps = 23/884 (2%)

Query: 1   MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60
           M+  A+E  P+++EEE++ SYLDYAMSVIVGRALPD RDGLKPVHRR LYAM    NDWN
Sbjct: 1   MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRALYAMHEQNNDWN 60

Query: 61  KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           +P++KSAR+VGDV+GKYHPHGDSA+Y+TIVRMAQPFSLR+MLVDGQGNFGS+DGD+AAAM
Sbjct: 61  RPFRKSARIVGDVMGKYHPHGDSAIYDTIVRMAQPFSLRHMLVDGQGNFGSVDGDNAAAM 120

Query: 121 RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180
           RYTE+R++KIAHE+L D++KETVDF+PNYDG+ Q P V+P+R+PNLLVNGS+GIAVGMAT
Sbjct: 121 RYTEVRLTKIAHEMLNDIDKETVDFIPNYDGSLQEPSVLPSRLPNLLVNGSAGIAVGMAT 180

Query: 181 NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI 240
           NIPPHNL EVV+ CL  +     +++ LME +  PDFPTA II G  G+++ YRTGRG++
Sbjct: 181 NIPPHNLNEVVDACLHLLKAPEATIDELMEIVPAPDFPTAGIIYGINGVKDGYRTGRGRV 240

Query: 241 YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG 300
            +RA+   E   +  R+ IIV E+PYQVNK  L E+IAELV +K+IEGIS ++DESDK G
Sbjct: 241 VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERIAELVHEKKIEGISHIQDESDKSG 300

Query: 301 MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE 360
           MR+VIE+KR  V EVVLNNLY QTQLQ +FGINMVAL  GQP++  LKD++  F+ HRRE
Sbjct: 301 MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPRLCNLKDLIQVFLEHRRE 360

Query: 361 VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV 420
           VVTRRT+F LRKAR+R H+LEGLA+ALANID  I +IR + +P  AKA L+ + W+   V
Sbjct: 361 VVTRRTVFNLRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMTRQWDSQLV 420

Query: 421 ATMLERAGDDAA-------RPEWLEPEFGI-RDGRYYLTEQQAQAILDLRLQKLTGMEHE 472
             ML RA  D         RPE LE EFG+  DG Y L+E QAQ +L +RLQ+LTG+E +
Sbjct: 421 REMLTRARADGGVVNADDYRPEGLEREFGMSSDGLYRLSETQAQEVLQMRLQRLTGLEQD 480

Query: 473 KLLDEYKELLAEIAELLYILNSPERLMEVIREELEAIKTQYSD----ERRTEITANTADI 528
           K++ EYKE++AEI +LL IL  P R+  +I +EL  +K ++       RR+EI  N  D+
Sbjct: 481 KIVAEYKEVMAEIDDLLDILAKPARVSTIISDELTLLKQEFGQTKLGARRSEIEHNAQDL 540

Query: 529 NIEDLINQEDVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHD 588
             EDLI   D+VVTLSH GY+K QPLS+Y +Q+RGG+GK A   KE+D+ID+L +ANTHD
Sbjct: 541 ATEDLITPTDMVVTLSHSGYIKSQPLSEYRSQKRGGRGKQATATKEDDWIDQLFIANTHD 600

Query: 589 TILCFSSRGRLYWMKVYQLPEASRGARGRPIVNLLPLEADERITAILP----VREYEEGR 644
            ILCFS+RGRLYW+KV+++P  SRG+RGRPIVN+ PL+  E+I  +LP    +R +   R
Sbjct: 601 YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVVLPLTGEMRSFPSDR 660

Query: 645 HIFMATASGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVV 704
           ++FMAT+ GTVKKTAL EFS PR AGIIAV+L+EGD LIG  LTDG  + MLFS  GK V
Sbjct: 661 YVFMATSMGTVKKTALDEFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDGGKAV 720

Query: 705 RFSEQAVRSMGRTATGVRGINLQGEDRVVSLIIPRG-EGDILTVTQNGFGKRTAVSEYPT 763
           RF E  VR MGR A GVRG+ ++    V+++++    E  +LT T NG+GKRT ++EY  
Sbjct: 721 RFDENDVRPMGRNARGVRGMLIEDTQSVIAMLVAEDEEQSVLTATINGYGKRTPIAEYTR 780

Query: 764 KSRATKGVISIKVSERNGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVT 823
             R TKG+I+I+ SERNGKVV A  V   D+IM+ITD G LVRTRVSE+  +GR TQGVT
Sbjct: 781 HGRGTKGMIAIQQSERNGKVVAATLVHNDDEIMLITDKGVLVRTRVSEIREMGRATQGVT 840

Query: 824 LIRTAEDEHVVGLQRVAEPVEDEELDGVVKVEGEVAEDDDAIDD 867
           LI   E   + GLQR+ E       D  V   G+ A   DA DD
Sbjct: 841 LIALDEGAELSGLQRIVEN------DANVPELGDDANAADAADD 878