Pairwise Alignments

Query, 500 a.a., efflux RND transporter periplasmic adaptor subunit from Pectobacterium carotovorum WPP14

Subject, 490 a.a., Probable copper RND efflux membrane fusion protein, CzcB family from Pseudomonas putida KT2440

 Score =  296 bits (759), Expect = 8e-85
 Identities = 177/471 (37%), Positives = 250/471 (53%), Gaps = 4/471 (0%)

Query: 14  LMALAILSAGGVGYLVGKQQTPHSASTAEPERAVLYWYDPMVPDKRFDKPGKSPFMDMEL 73
           + A+A+    G GY +G    P  A     E+  LYWYDPM P + F  PGKSPFMDM+L
Sbjct: 9   ITAIALAIGVGTGYWLGHPAQPAQAPAIATEQKPLYWYDPMYPQQHFPAPGKSPFMDMQL 68

Query: 74  VPRYADDVQE--DGGVIVSARQQQNLGVRTARAEMRELTDRTTGYGTVALNERGLHTLVA 131
           V +YA++  +  +  V +S   QQNLGVR A      L       G +A +ER    L A
Sbjct: 69  VAKYAEEGTDPAEPAVQISQGVQQNLGVRLATVSRGRLQRTLQVSGVLAFDERDFSVLQA 128

Query: 132 PSGGIVEKLTVNALQQQVKKGETLATLWNPTWAAAQREYLVVRQLGDDTLTQSARQRLAL 191
            + G VE+    A    V KG  LA +  P WA  Q E+L +R LGD  L  +ARQRL L
Sbjct: 129 RTAGFVERTYGRATGDVVAKGAPLADVLAPEWAGLQEEFLALRHLGDVQLLAAARQRLLL 188

Query: 192 LFMPEAIIRQVERSGKPQDRIAITAPEDGYVNKLEVRQGMQLSPAQPLFELASLNPVWVD 251
             MP  ++ +V RSGK Q+++ + AP  G +  L++R GM ++P   L  +  +  VW++
Sbjct: 189 AGMPGELVDRVARSGKVQNQVTLVAPSAGVIQALDLRPGMTVTPGATLARINGIANVWLE 248

Query: 252 VDYPEAQAAQLTIGSDISATSSAWPGKTFHGKVSELLPMLDSTTRTLKARVVLDNPQQQL 311
              PEAQA+ L  G  + A   A+PG+T  GK++ LL   D  +RTL+ R+ L N   +L
Sbjct: 249 AAVPEAQASGLHEGQAVEAHLPAYPGETVQGKLTALLADADLQSRTLRLRIELPNKDGRL 308

Query: 312 KPGMYLTVQLSHTQ-AQPRLAIPQEALLVSGSQNRVLLSDGNGHFTPRNVTVGASLGDWV 370
           +PGM   V L   + A   L +P EA++ +G ++ V++++  G F P  V +G   G  V
Sbjct: 309 RPGMTAQVSLRPGENADDSLLLPAEAVIRTGKRDLVMVAEDQGRFRPIEVVLGQENGGQV 368

Query: 371 EILDGLKAGDNVVTSGQFLIDSEASLRSALPQFDAETSANPATPTAPAGYRTQGVIRAIN 430
            IL GL+AG  VV SGQFLIDSEASL+  +    A  S   +    P  ++  G +  I 
Sbjct: 369 AILKGLQAGQKVVASGQFLIDSEASLK-GIEATTASDSPPASQAPEPELHQADGRVVQIE 427

Query: 431 GKQATIEHEAVPALNWSPMTMDFTLPSSGLPQGVGIGSTVSFQFSMDDSGI 481
           G Q TI+H     L    MTM F +    L  G+ +G  + F     D G+
Sbjct: 428 GTQLTIDHGPFVTLGMPGMTMTFPVADPALVNGLKVGDRIRFGIRERDDGM 478