Pairwise Alignments

Query, 892 a.a., TonB-dependent receptor from Pectobacterium carotovorum WPP14

Subject, 885 a.a., ligand-gated channel from Pseudomonas simiae WCS417

 Score =  739 bits (1909), Expect = 0.0
 Identities = 396/895 (44%), Positives = 550/895 (61%), Gaps = 49/895 (5%)

Query: 24  IALSLSGSLHYAQAETQAASVQEAARQSSAF--SISAQPLSSALLRFAEQAGLQVFFADV 81
           +AL++   L  A A   AA     A Q +     I AQ L SA+L FA+QAGLQV F   
Sbjct: 14  LALAIHVGLFAAAAPVYAAQPAVKAAQPAVLMLDIPAQSLGSAVLAFADQAGLQVLFDSQ 73

Query: 82  KLENMQAAALQGRFTPEQGLRQLIGANPVDFQIGSNGVITLRPRSVNVDTAKIDDVMTVR 141
           +L  +Q+  + G+++ ++GL +L+G  PV+++      +TL      V+ +     +   
Sbjct: 74  RLAGLQSTTVNGQYSVQEGLARLLGNAPVEYRFNGERQVTL----TRVEQSGAALALATT 129

Query: 142 AFTVANPGDWIYEQPRAISVISREQMDNRPSRHAADMLEQSAGVYSSVSQQDPSLSVNIR 201
             T  +P DW+Y  PR++SV+ REQ+D  P RHAA+MLE++ GVYS+VSQQDP LSVNIR
Sbjct: 130 TITGLHPNDWVYSTPRSVSVVGREQLDRNPPRHAAEMLEEAPGVYSAVSQQDPGLSVNIR 189

Query: 202 GIQDFGRVNMNIDGVRQNFQKTGYGQRNGQMYIDSELLAGATIEKGATNVMGSAGTLGGV 261
           GIQD+GRVNM++DG+RQN+Q++G+ QRNG +Y+DSELL+   IEKGAT+ MG AG +GGV
Sbjct: 190 GIQDYGRVNMSVDGMRQNYQQSGHQQRNGTLYVDSELLSEVVIEKGATSTMGGAGVIGGV 249

Query: 262 ATFNTVNAHDFLAPGKELGGKLHASTG----DNGTHFIGSGVLALGNERGDILVGASERH 317
           A F TV A D L  GKE+GG++  +TG     NGTHFIGS   A+G +  D+L+ ASERH
Sbjct: 250 ANFRTVEAADLLKDGKEIGGRIRVTTGLGGRSNGTHFIGSSAFAVGTDVWDMLLAASERH 309

Query: 318 LGNYWPGNDGNLGNIRIPGNSSNYEAWANNLKHQKVTSAAYTMRSRLAKIGWNLPANQRF 377
           LG+Y PG  G++G++R    +S        +K+  V  +   MRSRL K+G NLP +QR 
Sbjct: 310 LGDYNPGTKGSIGDLRT--GTSFLPNSQERIKNTTVAYSGSVMRSRLLKLGINLPVDQRL 367

Query: 378 QLSYMQTQTSSENAGTLSNLSNTELGWKASGHSEIMARSTALDYSLKPDNQRWLDFKAKI 437
           QLSY+ T    ++   +S     +L W+  G S++ A++ ALDYS  PDN   +DFKAK+
Sbjct: 368 QLSYLTTAVGYDDVNMMS-AEKAQL-WEKLGSSDVTAQNVALDYSYTPDNP-LIDFKAKL 424

Query: 438 YYADTNNDTNNYALSNTSAYHESTRLRTYGAQAQNTSTLWQQGAHDLKADYGLDFYYDKI 497
           YY DT ND +     ++  Y  + +  TYG QAQN ST        +KA+YGL+F+YDK+
Sbjct: 425 YYVDTRNDQSTLTRGSSKGYEVTYQTNTYGFQAQNMSTFALSELSVIKANYGLEFFYDKV 484

Query: 498 TTDS----------TNSTASNATPEGNRAMASLFANLNYAYDEWVTLQGGLRYDRYRLRG 547
             DS          T S A + TP+G+RAM SLF  L+Y YD W+ L  GLRYDRYRLRG
Sbjct: 485 RPDSNQMVASDSAVTASAAESVTPKGDRAMGSLFTRLDYDYDNWLNLNAGLRYDRYRLRG 544

Query: 548 TTSISYREIPYTVTNPCTARSIALCPPFVTTTQDWNVDDEHGKLSPTLFAGVRPGVEWLQ 607
            T ++ R          T R + L          ++VD E G  SPT    ++PGV+WLQ
Sbjct: 545 ETGLNTRTFIIG-----TTRQVGL-------PMTYDVDREEGHFSPTFGLSIKPGVDWLQ 592

Query: 608 LYTSYGLSWRPPSVSETFANG-TYSAGNYYLYPNPNLKPERSRAWEVGFNIQKPELFTDG 666
           L+ +YG  WRPP+V+ET  +G  +  G+  ++PNP LKPE S AWEVGFN+ K +L    
Sbjct: 593 LFATYGKGWRPPAVTETLVSGRPHGGGSESIFPNPFLKPETSTAWEVGFNVLKEDLLFAD 652

Query: 667 DRLVTKVSYFDTRINNYISLNGARNKPGYNGYSLSNSVFQNNLAKSRFRGMEYQLNYDAG 726
           DR   KVSYF+TR++++  +      PGY   ++ N+ + NNL  +RFRG+EYQL+YDAG
Sbjct: 653 DRAGMKVSYFNTRVDDFSYMALGVQPPGYGIANIGNAAYVNNLETTRFRGLEYQLDYDAG 712

Query: 727 FLYVDATYTHMIGNNDFCAPVAWMGGVTTV---GGSRGNYYS-TPVDTTASDASCQKTLL 782
           F Y    YT M+G+N FC+  AW+GGVT +    GSR    +  P D   +   C  + +
Sbjct: 713 FAYGQFNYTRMLGSNRFCSKTAWLGGVTKIQKGPGSRAPVTAMVPDDVANAGQGC--SAI 770

Query: 783 FSNAAYLPGDRGSVTLGTRVFDRKLDMGVTMRFAPGYQ-----DAAAPANSAYLADWPKY 837
             ++ ++P DRG+ TLG R F+RKLD+GV  R++ GY               Y ADW  Y
Sbjct: 771 LGSSEHMPMDRGTATLGARFFERKLDVGVRARYSGGYYVKGGVGVTTSQTGVYPADWKPY 830

Query: 838 EVYDLYASYRLTDSLTVRGSVENIANRTYVVSYGESLGYTPSRGRTVQAGVEYRF 892
            VYDLY+SYR TD LT+R ++EN+ +R Y+V  G+ L +T  RGRT+Q  VEY+F
Sbjct: 831 TVYDLYSSYRATDQLTLRLAMENVTDRAYLVPLGDVLAFTLGRGRTLQGTVEYQF 885