Pairwise Alignments

Query, 892 a.a., TonB-dependent receptor from Pectobacterium carotovorum WPP14

Subject, 811 a.a., ligand-gated channel from Pseudomonas simiae WCS417

 Score = 69.7 bits (169), Expect = 7e-16
 Identities = 76/310 (24%), Positives = 126/310 (40%), Gaps = 46/310 (14%)

Query: 17  PLSLAVGIALSLSGSLHYAQAETQAASVQEAARQSSAFSISAQPLSSALLRFAEQAGLQV 76
           P +LA+ ++L ++G   Y QA            Q     I AQ L SAL  F  QA LQV
Sbjct: 24  PSALALAVSLPVAG---YVQA------------QEIELDIPAQALGSALQEFGRQANLQV 68

Query: 77  FFADVKLENMQAAALQGRFTPEQGLRQLIGANPVDFQIGSNGV-ITLRPRSVNVDTAKID 135
            ++   +    + A++G+  P+Q +  L+        +  N + +T    S  ++ +   
Sbjct: 69  LYSPTDVAGKNSTAIKGKLDPQQAINTLLAGTSTTHSLSGNALTVTAAGASAGLELSPTQ 128

Query: 136 DVMTVRAFTVANPGDWI--------------YEQPRAISVISREQMDNRPSRHAADMLEQ 181
               V        G +                E P++I+VI+R+ +++    +  D++  
Sbjct: 129 VTGNVLGNITEGSGSYTPGTIATATRLTLTPRETPQSITVITRQHIEDFGLNNVDDVMRH 188

Query: 182 SAGVYSSVSQQDPSLSVNIRGIQDFGRVNMNIDGVRQNFQKTGYGQRNGQMYIDSELLAG 241
           + G+  S    D + +   RG   F   +   DG+    +  GY    G    D  +   
Sbjct: 189 TPGITVSAYDTDRT-NYYSRG---FSVNSFQYDGIPSTVRNVGYSA--GNTLSDMAIYDR 242

Query: 242 ATIEKGATNVMGSAGTLGGVATFNTVNAHDFLAPGKELGG--KLHASTGDNGTHFIG-SG 298
             + KGAT ++  AG+LG  AT N +       P  E  G  +L A + DN    +  SG
Sbjct: 243 VEVLKGATGLLNGAGSLG--ATINLIRK----KPTSEFKGHVQLGAGSWDNYRSEVDVSG 296

Query: 299 VLA-LGNERG 307
            L   GN RG
Sbjct: 297 PLTDSGNVRG 306