Pairwise Alignments

Query, 281 a.a., deoxyribonuclease IV from Pectobacterium carotovorum WPP14

Subject, 285 a.a., endonuclease IV with intrinsic 3'-5' exonuclease activity from Escherichia coli BL21

 Score =  472 bits (1215), Expect = e-138
 Identities = 231/278 (83%), Positives = 249/278 (89%)

Query: 1   MKYIGAHVSASGGVDQAVIRAHEIQATAFALFTKNQRQWQAAPLSTEVIDRFKTACEQYA 60
           MKYIGAHVSA+GG+  A IRA EI ATAFALFTKNQRQW+AAPL+T+ ID FK ACE+Y 
Sbjct: 1   MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60

Query: 61  YTPAQILPHDSYLINLGHPDAEALEKSRIAFIDEMSRCQQLGLSLLNFHPGSHLKQIEEA 120
           YT AQILPHDSYLINLGHP AEALEKSR AFIDEM RC+QLGLSLLNFHPGSHL QI E 
Sbjct: 61  YTSAQILPHDSYLINLGHPVAEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE 120

Query: 121 DCLARIAESINIALAETDGVTAVIENTAGQGSNLGFRFEHLAAIIDGVEDKSRVGVCIDT 180
           DCLARIAESINIAL +T GVTAVIENTAGQGSNLGF+FEHLAAIIDGVEDKSRVGVCIDT
Sbjct: 121 DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT 180

Query: 181 CHAFAGGYDLRTEADCEATFAEFDRIVGFRYLRGMHLNDAKSAFGSRVDRHHSLGEGNIG 240
           CHAFA GYDLRT A+CE TFA+F RIVGF+YLRGMHLNDAKS FGS VDRHHSLGEGNIG
Sbjct: 181 CHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLNDAKSTFGSSVDRHHSLGEGNIG 240

Query: 241 KTAFSYIMKDARFDSIPMILETINPDIWADEIAWLKSE 278
             AF +IM+D RFD IP+ILETINPDIWA+EIAWLK++
Sbjct: 241 HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQ 278