Pairwise Alignments

Query, 257 a.a., DNA-binding transcriptional repressor DeoR from Pectobacterium carotovorum WPP14

Subject, 261 a.a., Deoxyribose operon repressor, DeoR family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  193 bits (491), Expect = 3e-54
 Identities = 109/257 (42%), Positives = 152/257 (59%), Gaps = 3/257 (1%)

Query: 1   METRRDERIGRLAQALKKTDKLHLKDAAQLLGVSEMTVRRDLNADSTSV--MLLGGYVVS 58
           MET++ ERI RL + LKKTD++HLKDAA++L VS MT+RRDL+ D   +   LLGGY+V 
Sbjct: 1   METKQKERIRRLMELLKKTDRIHLKDAARMLEVSVMTIRRDLSQDDDPLPLTLLGGYIVM 60

Query: 59  DLKNNGVTNYFVSDQQSKHVREKQAIGTAAAYLVEANDTVFFDCGTTIPFIIDAIPDELS 118
             K    TN  +  +++ H R+   +   AA LV  ND VFFD G  +P +I  IPD+++
Sbjct: 61  VNKPASSTNMPLPAKKTHH-RDDLPVAILAAGLVRENDLVFFDNGPEMPLVISMIPDDIT 119

Query: 119 FTAICYSLNTFLALQEKKACRVILCGGEYHPDNAIFTPLNQRSELDNICPNKAFISAAGI 178
           FT ICYS   F+AL EK     ILCGG Y   +  F   N  S LD++ P K FISA+G+
Sbjct: 120 FTGICYSHRVFIALNEKPNATAILCGGTYRAKSDAFYDANNPSALDSLNPRKVFISASGV 179

Query: 179 ELTAGATCFNFAELGMKQRAMATAQRIIMVADSSKFGQIKRACIGPMTLFDTVISDSAPS 238
               G + FN  +L  K++AM    R I++A  + F ++  A IGP++ FD +ISD    
Sbjct: 180 HEHFGVSWFNPDDLAAKRKAMERGLRKILLARHALFDEVAPASIGPLSAFDVLISDRPLP 239

Query: 239 ESYLRYFSNNGIQFIHP 255
             Y  +  N  ++ I P
Sbjct: 240 TDYAVHCRNGSVKVITP 256