Pairwise Alignments

Query, 422 a.a., MFS transporter from Pectobacterium carotovorum WPP14

Subject, 387 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  170 bits (431), Expect = 6e-47
 Identities = 117/380 (30%), Positives = 185/380 (48%), Gaps = 11/380 (2%)

Query: 39  PQFMRVTLALFSAGLATFALLYCVQPLLPVLSQDFGISPATSSLSLSVSTVMLAFGLLFT 98
           P+     LALF  G A F  LY  Q +L   +  F IS   +  S++V+T+ +A    F 
Sbjct: 3   PRLHCARLALFLCGCAAFLNLYATQSILQTFATQFHISAKMAGWSITVTTLAVAITAPFV 62

Query: 99  GPLSDTIGRKNVMVVSLMLAAICTIICAFMTSWNGVLIMRAMMGLSLSGVAAVAMSYLSE 158
             L+     + V+ V+ +L A+  ++ A+  S+  VL+ R + G+ +  V A +++Y+ +
Sbjct: 63  SRLTGRFELRTVISVAALLLAVPALMTAYADSFAEVLVWRFVEGMLIPVVFATSVAYIGD 122

Query: 159 EIHPSVLAFSMGLYISGNSIGGMSGRLVSGVLTDYFPWRVAIGTIGVLALIAAITFWRIL 218
                 +     LY++G  +GG +GR V+GV+T+Y  WR A   + VL+L        +L
Sbjct: 123 RWRGGTVTEVTSLYVAGTVLGGFAGRFVTGVMTEYAGWREAFELLAVLSLTVGGFIQFLL 182

Query: 219 PESRHFRPGSLRPKTLLLNSKLHWRDAGLPLL--FLEGFLLMGAFVTLFNYIGYRLLAPP 276
           P S H RP  LR +T    S +  +    PLL  +  GF ++ + V  F Y G  L  PP
Sbjct: 183 PAS-HGRP--LRGETAF--SAVFRK----PLLAAYAVGFCVLFSQVAAFTYAGLYLGLPP 233

Query: 277 YLLSQAVVGLLSVVYLTGSYSSPKAGALTARYGRGPVLSIAILLMLAGLGMTALSPLFAI 336
           + L  A +G L  V+L      P AG L+       +LS+A  L ++G  +T +  L+ I
Sbjct: 234 FGLGPAALGTLYTVFLLALIVIPVAGRLSKSRPHAELLSVAAGLGISGSALTLVPSLWCI 293

Query: 337 FGGMMLFTAGFFAAHSVASSWIGQRARRAKGQASSMYLFSYYLGSSLAGTLGGFFWHSFG 396
             G+ L + G F A + A+++    A   K  A  MYL  YYLG S    +    W  +G
Sbjct: 294 VVGLALSSTGVFLAQAAANAFTAATAGDNKAGAVGMYLTCYYLGGSCGAIVPALIWERWG 353

Query: 397 WMGITVFLSALLFLALAVSL 416
           W G    + A   L L ++L
Sbjct: 354 WAGCVTLIIAFQILTLLIAL 373