Pairwise Alignments

Query, 314 a.a., sugar-binding transcriptional regulator from Pectobacterium carotovorum WPP14

Subject, 319 a.a., LsrR, transcriptional repressor of lsr operon from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  115 bits (288), Expect = 1e-30
 Identities = 84/317 (26%), Positives = 159/317 (50%), Gaps = 24/317 (7%)

Query: 6   EQRLLVKIATLYYSEGMKQAEIAASLHLSQSFVSRAITRCVKEGVVKISVIQPPNMFMGL 65
           E+  + +IA  YY +G+ Q+EI+  L L++  VSR + +  + G++++ +       +  
Sbjct: 14  EEEQVARIAWFYYHDGLTQSEISERLGLTRLKVSRLLEKGHQSGIIRVQINSRFEGCLEY 73

Query: 66  EAAIQKRYGIDQAIVVDVADNATLAQIKQAIGSAAAHYVQTSIRPDDLVGIS---SWSST 122
           E A++  + +    V+    +A    I   +G  AAH +  S+RP  L+ +    +  +T
Sbjct: 74  ENALRNHFALQNIRVLPALPDA---DIGLRLGIGAAHMLMESLRPQQLLAVGFGEATMTT 130

Query: 123 LRAMVDSLHPQSVKAQGVIQLLGGVGPNGNVQATILTQTLANQLSCPAYLLPAQSIERSV 182
           L+ +   +  Q ++   ++ L GGVGP        +T       +C   ++PA     S 
Sbjct: 131 LKRLSGFISAQQIR---LVTLSGGVGP-------YMTGIGQLDAACSVSIMPAPLRASSQ 180

Query: 183 EDRARLVTSDEVSSVVDKFSEVSLALVGIGVL---EPSQLLKNSGNYYHEAMLQQLAERG 239
           E    L   + V  V+        A+VGIG +   + + +LK+   Y  +     +  +G
Sbjct: 181 EIACTLRNENSVRDVMLTAQAADAAIVGIGAINQKDQASILKSG--YITQGEQLMIGRKG 238

Query: 240 AVGDLCLHYYNAEGEPVLQDDE--DPVIGMALPQLRQCPRVVALAGGIEKSAAIRGALTG 297
           AVGD+  ++++A GE ++ D +  + +IG+ L  L   P V+ +AGG +K+ AI  A+ G
Sbjct: 239 AVGDILGYFFDAHGE-IIPDIKIHNELIGLKLNSLSTIPTVIGVAGGEQKAEAIIAAMRG 297

Query: 298 HYVDVLITDRLTAETLI 314
           +Y++ L+TD+ TA  +I
Sbjct: 298 NYINALVTDQKTAGKII 314