Pairwise Alignments

Query, 373 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Pectobacterium carotovorum WPP14

Subject, 661 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  166 bits (419), Expect = 2e-45
 Identities = 101/286 (35%), Positives = 160/286 (55%), Gaps = 34/286 (11%)

Query: 8   TRRKSTRIYVGKVPVGDGAPIAVQSMTNTRTTDVEATVNQIRALERVGVDIVRVSVPTMD 67
           +RRK+  + +G V +G   PI VQSMT   T D E ++ +   + + G +++R++ P++ 
Sbjct: 20  SRRKTIPVQIGDVVIGGDNPIVVQSMTTKDTMDTEGSIEECIRMIKSGCELIRITAPSIK 79

Query: 68  AAEAFKLIKQQV-----NVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNE------- 115
            AE  + IK  +     +VPLVADIHF    A ++A   V+ +RINPGN  ++       
Sbjct: 80  EAENLRHIKAGLAERGYHVPLVADIHFTPNAA-EIAARIVEKVRINPGNYADKKKFEEIE 138

Query: 116 ----------ERIRS----VVDCARYNNIPIRIGVNGGSLEKDLQEKYGEPTPEALLESA 161
                     ERIR     +V   + +   +RIG N GSL   +  +YG+ TP  ++ESA
Sbjct: 139 YTDESYQAELERIRERFLPLVKICKEHGTAMRIGTNHGSLSDRIMSRYGD-TPLGMVESA 197

Query: 162 MRHVDILDRLNFDQFKVSVKASDVFLAVQSYRLLAARIDQ------PLHLGITEAGGARS 215
           +  + I +  ++    +S+K+S+  + VQ+YRLL  ++D+      PLHLG+TEAG    
Sbjct: 198 LEFLRICEEEHYHDIVISMKSSNTQVMVQAYRLLVQKLDEGGFQPYPLHLGVTEAGDGED 257

Query: 216 GAVKSAIGLGLLLSEGIGDTLRISLAADPVEEVKVGFDILKSLRIR 261
           G VKSA+G+G LL +G+GDT+R+SL  DP  E  V   ++    +R
Sbjct: 258 GRVKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKALIDRYALR 303



 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 20/177 (11%)

Query: 194 LLAARIDQPLHLGITEAGGARSGA----VKSAIGLGLLLSEGIGDTLRISLA--ADP--- 244
           L+ A I  P+   +TEAG     A    + +A  LG LL +G+GD + + L   A P   
Sbjct: 477 LINAEIRLPV---VTEAGYKEQDADQTMLYAATDLGGLLIDGLGDGVMLGLEEKAAPDRD 533

Query: 245 --VEEVK----VGFDILKSLRIRARGINFIACPTCSRQEFDVIGTVNALEQRLEDLITPM 298
             +E +K    V F +L++ R R     +I+CP+C R  FD+  T   + +R  D +  +
Sbjct: 534 ALMETIKLHNSVSFGVLQAARTRMSKTEYISCPSCGRTLFDLQETTAMIRKR-TDHLKGV 592

Query: 299 DVSIIGCVVNGPGEALVSTIGVTG-GHNKSGFYEDGVRQRERFDNEQMIDQLEAKIR 354
            + I+GC+VNGPGE   +  G  G G  K   Y+     +    +EQ +D+L   IR
Sbjct: 593 KIGIMGCIVNGPGEMADADYGYVGSGKGKITLYKGKEVVKRAVPSEQAVDELINIIR 649