Pairwise Alignments

Query, 325 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Pectobacterium carotovorum WPP14

Subject, 320 a.a., 23S rRNA pseudouridine(1911,1915,1917) synthase from Pseudomonas putida KT2440

 Score =  372 bits (954), Expect = e-108
 Identities = 185/319 (57%), Positives = 234/319 (73%), Gaps = 1/319 (0%)

Query: 1   MAQQVQLTATVAESQLGQRLDQALAELFPDYSRSRIKEWILENRVQINGNVTNKPKEKVL 60
           M++ +QL+A V     GQRLDQ  A+LF +YSRSR+  WI E R+ ++G V  +P++ V 
Sbjct: 1   MSEIIQLSAEVPSELGGQRLDQVAAQLFAEYSRSRLTSWIKEGRLTVDGAVV-RPRDLVH 59

Query: 61  GGESVAIDALIEEEARWEAQDIKLDIVYEDQDILVINKPRDLVVHPGAGNPDGTVLNALL 120
           GG  +A++A  E +  W A+DI+LDIVYED  ILVINKP  LVVHP AG+  GT+LNALL
Sbjct: 60  GGSQLALEAEQEAQGEWIAEDIELDIVYEDDHILVINKPAGLVVHPAAGHASGTLLNALL 119

Query: 121 HHYPEIVDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVEALQAREITREYEAVAIGSMT 180
           HH P+IV+VPRAGIVHRLDKDTTGLMVVAKT+ AQT+LVE +QAR+++R YE + IG +T
Sbjct: 120 HHVPDIVNVPRAGIVHRLDKDTTGLMVVAKTLQAQTKLVEQMQARKVSRIYECIVIGVVT 179

Query: 181 AGGMVEQPIARHATKRTHMAVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM 240
           AGG ++ PI RH   R  MAV   GKPAV+HYR+++ FR+HT +R++LETGRTHQIRVHM
Sbjct: 180 AGGKIDAPIGRHGGMRQRMAVTDGGKPAVSHYRVLKRFRSHTHVRVKLETGRTHQIRVHM 239

Query: 241 AHINHPLVGDQLYGGRPRPPKGASEDFIEMLRGFDRQALHATMLRFYHPITGIHMEWHAE 300
           AH+  PLVGDQ YGGR R P  AS   +E ++ F RQALHA  L   HPITG  M+W + 
Sbjct: 240 AHVGFPLVGDQTYGGRFRIPPAASPTMVEAVKTFPRQALHARFLALAHPITGEVMKWESP 299

Query: 301 LPQDMVDLIDALKADTEAF 319
           LP D V L+  L  D E+F
Sbjct: 300 LPDDFVWLLSLLNQDRESF 318