Pairwise Alignments

Query, 325 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Pectobacterium carotovorum WPP14

Subject, 326 a.a., 23S rRNA pseudouridine(1911,1915,1917) synthase from Escherichia coli BL21

 Score =  559 bits (1440), Expect = e-164
 Identities = 271/325 (83%), Positives = 297/325 (91%)

Query: 1   MAQQVQLTATVAESQLGQRLDQALAELFPDYSRSRIKEWILENRVQINGNVTNKPKEKVL 60
           MAQ+VQLTATV+E+QLGQRLDQALAE+FPDYSRSRIKEWIL+ RV +NG V +KPKEKVL
Sbjct: 1   MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVL 60

Query: 61  GGESVAIDALIEEEARWEAQDIKLDIVYEDQDILVINKPRDLVVHPGAGNPDGTVLNALL 120
           GGE VAI+A IEEEAR+E QDI LDIVYED+DI++INKPRDLVVHPGAGNPDGTVLNALL
Sbjct: 61  GGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALL 120

Query: 121 HHYPEIVDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVEALQAREITREYEAVAIGSMT 180
           H+YP I DVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE+LQ REITREYEAVAIG MT
Sbjct: 121 HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMT 180

Query: 181 AGGMVEQPIARHATKRTHMAVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM 240
           AGG V++PI+RH TKRTHMAVHPMGKPAVTHYRIMEHFR HTRLRLRLETGRTHQIRVHM
Sbjct: 181 AGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM 240

Query: 241 AHINHPLVGDQLYGGRPRPPKGASEDFIEMLRGFDRQALHATMLRFYHPITGIHMEWHAE 300
           AHI HPLVGD +YGGRPRPPKGASE FI  LR FDRQALHATMLR YHPI+GI MEWHA 
Sbjct: 241 AHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAP 300

Query: 301 LPQDMVDLIDALKADTEAFKDQLDW 325
           +PQDMV+LI+ ++AD E  KD++DW
Sbjct: 301 IPQDMVELIEVMRADFEEHKDEVDW 325