Pairwise Alignments

Query, 383 a.a., tRNA/rRNA methyltransferase from Pectobacterium carotovorum WPP14

Subject, 345 a.a., predicted methyltransferase (NCBI) from Escherichia coli BW25113

 Score =  443 bits (1140), Expect = e-129
 Identities = 236/387 (60%), Positives = 275/387 (71%), Gaps = 46/387 (11%)

Query: 1   MSDSFNSKSGKVRVMYVRSDDEGEKENKNKRPAERDRR-GDRRDGGGSRDQREKPKHPRD 59
           M+D    KSGKV+VMYVRSDD+ +K   N R  +   R G  R  GG R           
Sbjct: 1   MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRR----------- 49

Query: 60  VNPRYARENPSRDGDSNAKSPWGNKDRNERSGDKPRRPRGDDTGGYESPWKTVSRAPGDS 119
                    P+RD                   DK  +PR  D    +SPW+TVSRAPGD 
Sbjct: 50  ---------PARD-------------------DKQSQPR--DRKWEDSPWRTVSRAPGD- 78

Query: 120 ETP---DHGGITGKSHIDPEQLRRQRQEETRVYGENACQALFKNRSEVIVRAWFLQEVTP 176
           ETP   DHGGI+GKS IDPE LRRQR EETRVYGENACQALF++R E IVRAWF+Q VTP
Sbjct: 79  ETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP 138

Query: 177 RFRDALRWMAANRKAYHVVEEEELIKASGTEHHGGVCFLIKKRQGMDVREYLKTAGEHDC 236
           RF++ALRWMAANRKAYHVV+E EL KASGTEHHGGVCFLIKKR G  V++++  AG  DC
Sbjct: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC 198

Query: 237 VLALEDVGNPHNLGGIMRSCAHFGVKGVLVQDAALLESGAAVRTAEGGAEHVKAINADDF 296
           VLALE+  NPHNLGG+MRSCAHFGVKGV+VQDAALLESGAA+RTAEGGAEHV+ I  D+ 
Sbjct: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDNI 258

Query: 297 LSVLTEFRNAGYTIVTTSSHKGTVLSKATLPAKTVIVLGQEGDGLSDSAWQQGDVKVSIG 356
           ++VL +FR AGYT+VTTSS +G  L K +LPAK V+VLGQE +GL D+A    D++V I 
Sbjct: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318

Query: 357 GTGKVESLNISVATGILLSEWWRQNQA 383
           GTG V  LNISVATG+LL EWWRQN+A
Sbjct: 319 GTGNVAGLNISVATGVLLGEWWRQNKA 345