Pairwise Alignments

Query, 818 a.a., ribonuclease R from Pectobacterium carotovorum WPP14

Subject, 742 a.a., ribonuclease R from Magnetospirillum magneticum AMB-1

 Score =  391 bits (1005), Expect = e-113
 Identities = 265/758 (34%), Positives = 398/758 (52%), Gaps = 43/758 (5%)

Query: 17  PIPSREYILAHIAKRDTPISREELAADLQLTGEEALEALRRRLRAMERDGQLIFTRRQCY 76
           PIPS++ IL  I  +   + + ELA    L G + ++ L+  L+ +ER+G +   +++ +
Sbjct: 8   PIPSKQEILDFIRSQPGRVGKRELARAFNLRGSDKID-LKAILKELEREGVVERGQKRRF 66

Query: 77  ALPEKLDLLRGTVIGHRDGFGFLRV-------EGRKDDLYLS---AEEMKRTIHGDVALA 126
           A P  L  +    I   D  G L         EGR   ++++   A E    + GD  LA
Sbjct: 67  ASPGTLPDVGVVEIIGTDSDGELLARPLNYEGEGRPPRIFMAPFRAGEAAVGV-GDRVLA 125

Query: 127 QPLGADRKGRREGRIVRVLEPRTGQIVGRYFVDA-GVGFVVPDDSRLSFDILIPKEEING 185
           +      +   E R +R++     +++G +  +  G G + P   +   + ++P+ E   
Sbjct: 126 KLKRVRGEDVYEARAIRIIGEARARVLGVFEPNPDGSGRLRPTSRKEKAEYMVPRGETGD 185

Query: 186 ARMGFVVVVELTQRAT--RRTKAVGKIVEILGDNMGTGLAVDIALRTHDIPHTWPPKVEE 243
           A+ G +V+ ++        RT +V + + +LG      L   +A+ T+D+P  +P   E 
Sbjct: 186 AKAGELVLADIMPGRLYGMRTASVKERMGLLGAPRSVSL---VAIHTNDVPFEFP---EA 239

Query: 244 QVKDLSEEVPEAAKKGRVDLRKLPLVTIDGEDARDFDDAVHCEP----KRGGGWRLWVAI 299
            ++  + E P A    R DLR +PLVTIDGEDARDFDDAV  EP    K  GGW   VAI
Sbjct: 240 ALQQAAAEGP-APMNERTDLRSIPLVTIDGEDARDFDDAVFAEPDPDPKNPGGWHCMVAI 298

Query: 300 ADVSYYVRPNTPLDHEARARGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTV 359
           ADVS+YVRP   LD EA  RG SVYFP +VVPMLPE LSNG CSL P  DR CM     +
Sbjct: 299 ADVSWYVRPGDSLDKEAFKRGNSVYFPDRVVPMLPEELSNGWCSLKPDEDRPCMAVHFWL 358

Query: 360 SAQGKLSSYKFYEAVMSSHARLTYTKVWHILQGDAELREHYKPLVGG-LEELHRMYKALE 418
            A G    ++F   +M S ARLTYT+V     G  + R    PL+   +E L+  + AL 
Sbjct: 359 DALGNKLHHRFVRGMMRSVARLTYTQVQAAKDGTPDDRTG--PLLAPVIEPLYGAWAALF 416

Query: 419 HAREVRGGIAFETEEAKFIFNAERRIERVEAVVRNDAHKLIEECMILANISAAKFVEKNE 478
             R+ RG +  +  E K     E ++E +    R D+H+LIE+ MI+AN+ AA+ +EK  
Sbjct: 417 RERKERGVLELDIPERKVTITPEGKVEAITERERFDSHRLIEDFMIMANVCAAETLEKVH 476

Query: 479 EPALFRVHDQPSEDHVLALRSVLGELGLTLKGGMKPQPKDYAELMNELADRPDREMLQTM 538
           +P ++R+HD PS++ +  LR  L  + L L  G   +P  +  ++  +    +  ++  +
Sbjct: 477 KPCMYRIHDLPSQEKLDGLREFLSSMDLKLAKGQVLRPAHFNRILEAVEGTANSHLVSEV 536

Query: 539 LLRSMKQAIYDPENRGHFGLALTSYGHFTSPIRRYPDLSLHRAIKYLLSDRHERWTSTGG 598
           +LRS  QA Y PEN GHFGL L  Y HFTSPIRRY DL +HRA   L+S  H      GG
Sbjct: 537 ILRSQAQAQYSPENIGHFGLGLARYAHFTSPIRRYADLLVHRA---LISGLH---LGEGG 590

Query: 599 WHSD-INEMLQLGMHCSMTERRADEATRDVADWLKCDFMQDHVGEVFTGIIASVTGFGFF 657
             +D + E  + G H S+TERRA  A R+  D     F+ D VG  F G ++ VT FG F
Sbjct: 591 LPADAVAEFAEWGEHISVTERRAATAEREAVDRYVTAFLADKVGATFAGKVSGVTRFGLF 650

Query: 658 VRLKDLFIDGLVHVSTLDNDYYRYDNIGQRLIGESRGQVYRLGDEVEIRVEAVHMDERNI 717
           V L     DGLV +STL  D+Y +D +   L+G+   + ++LG ++++ +   +    ++
Sbjct: 651 VTLDQTGADGLVPISTLPEDFYVHDEVHHCLVGKRTRKTFQLGQKLDVELAEANTLTGSM 710

Query: 718 DFALISSTRKVRGEGKTARDRVKKPDSREAKPARRRRS 755
            F       ++ G G+      + P S   K + R R+
Sbjct: 711 VF-------RLGGAGERGLRPPRPPQSGRPKRSFRSRT 741