Pairwise Alignments

Query, 818 a.a., ribonuclease R from Pectobacterium carotovorum WPP14

Subject, 804 a.a., ribonuclease R from Kangiella aquimarina DSM 16071

 Score =  800 bits (2067), Expect = 0.0
 Identities = 406/799 (50%), Positives = 545/799 (68%), Gaps = 13/799 (1%)

Query: 2   SQDPFLEREAEKYESPIPSREYILAHIAKRDTPISREELAADLQLTGEEALEALRRRLRA 61
           +QDP  E EA++Y++PI SR++IL  + + + P+S ++LA  L++   E +EAL++RL A
Sbjct: 6   NQDPQAELEAQRYQNPIASRQFILRQLEEANEPVSLDQLAKRLEMKEPEQVEALQKRLNA 65

Query: 62  MERDGQLIFTRRQCYALPEKLDLLRGTVIGHRDGFGFLRVEGRKDDLYLSAEEMKRTIHG 121
           MERDGQLI  R+  Y L +  DL+RG V+ HRDG+G+L +E   DD YLS  EM+   HG
Sbjct: 66  MERDGQLICNRKGRYCLVDATDLVRGKVLAHRDGYGYLALEKGGDDWYLSPREMQTVFHG 125

Query: 122 DVALAQPLGADRKGRREGRIVRVLEPRTGQIVGRYFVDAGVGFVVPDDSRLSFDILIPKE 181
           D  LA+    DR+GR EG IV +L+  T  IVGR   + G+ FV  +D R+  D++I  +
Sbjct: 126 DKVLARVRNVDRRGRTEGAIVEILDGSTSHIVGRLHEENGMKFVTSEDPRILHDLIIAPD 185

Query: 182 EINGARMGFVVVVELTQRATRRTKAVGKIVEILGDNMGTGLAVDIALRTHDIPHTWPPKV 241
           +   A +G VVV ++ QR  R   A G I E+LGD +  G+ ++IA+R H IPH WP  V
Sbjct: 186 DCMNAEIGQVVVAQIVQRPKRNQHARGIITEVLGDYLSAGMEIEIAIRNHQIPHEWPDDV 245

Query: 242 EEQVKDLSEEVPEAAKKGRVDLRKLPLVTIDGEDARDFDDAVHCEPKRGGGWRLWVAIAD 301
             +V +L  +V E   +GRVDLR+LPLVTIDGEDARDFDDAV+C  K  GGW LWVAIAD
Sbjct: 246 LSEVGELPVDVSEKDWQGRVDLRQLPLVTIDGEDARDFDDAVYCRRKAKGGWTLWVAIAD 305

Query: 302 VSYYVRPNTPLDHEARARGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSA 361
           VS+YVRP + LD EA  RG SVYFP  VVPMLPE+LSNGLCSL P+VDRLCMV EM+++A
Sbjct: 306 VSHYVRPGSALDQEALERGNSVYFPEFVVPMLPELLSNGLCSLKPKVDRLCMVAEMSLTA 365

Query: 362 QGKLSSYKFYEAVMSSHARLTYTKVWHILQGDAELREHYKPLVGGLEELHRMYKALEHAR 421
            G++++ KFY AVM SHAR TY KVW IL GD  L++ Y PLVG L+ELH ++KA    +
Sbjct: 366 TGQVTASKFYPAVMHSHARFTYDKVWGILSGDEALQKEYAPLVGDLKELHELFKARLKLK 425

Query: 422 EVRGGIAFETEEAKFIFNAERRIERVEAVVRNDAHKLIEECMILANISAAKFVEKNEEPA 481
           E RG I FET E + IF+  ++IE++   VRNDAHK+IEECMI AN++AA+F+EK E+P 
Sbjct: 426 EARGAIEFETTETQIIFDENKKIEKIVGRVRNDAHKIIEECMICANVAAAEFIEKYEKPG 485

Query: 482 LFRVHDQPSEDHVLALRSVLGELGLTLKGGMKPQPKDYAELMNELADRPDREMLQTMLLR 541
           ++RVH+ PSE+ +   R+ LGELG+ L GG  P+P+ Y EL + +A+RPD+E++QTM+LR
Sbjct: 486 VYRVHEGPSEERLEKFRAFLGELGIFLFGGSTPEPRHYRELHDAIAERPDQELIQTMMLR 545

Query: 542 SMKQAIYDPENRGHFGLALTSYGHFTSPIRRYPDLSLHRAIKYLLSDRHERWTSTGGWHS 601
           SM QA+Y P+N+GHFGLA  SY HFTSPIRRYPDL +HR IK +L+   +   + GG   
Sbjct: 546 SMMQAVYSPDNQGHFGLAFDSYTHFTSPIRRYPDLLVHRIIKSILAREFDMAGTDGGLGY 605

Query: 602 DINEMLQLGMHCSMTERRADEATRDVADWLKCDFMQDHVGEVFTGIIASVTGFGFFVRLK 661
           +  E++    H SMTERRAD ATRDV DWLKC++M   VGE + G I+SVT FG FV L 
Sbjct: 606 EEKELVTFTEHSSMTERRADLATRDVVDWLKCEYMLTRVGEEYWGTISSVTSFGIFVALD 665

Query: 662 DLFIDGLVHVSTLDNDYYRYDNIGQRLIGESRGQVYRLGDEVEIRVEAVHMDERNIDFAL 721
           +LF++GL+H+S L +DYY +D +  RLIGE + Q YR+GD V+I+V  V M++RNIDFAL
Sbjct: 666 ELFVEGLIHISELGDDYYHFDALKMRLIGEHKRQSYRVGDRVKIKVANVDMEQRNIDFAL 725

Query: 722 ISSTRKVRGEGKTARDRVK-----------KPDSREAKPARRRRSASK-APANFEPDAAF 769
           I      R E K  ++R K             D ++ K  ++RR   K A    +P++  
Sbjct: 726 IEREYVKREEPK-GQERKKLYAKAKKSGSLSGDGKKGKDGKKRRDYRKGASKGAKPESGS 784

Query: 770 RKEGDSSAKSDKSKAKPKK 788
            K+G  + K  + K   KK
Sbjct: 785 AKKGAKNTKPKRGKNGKKK 803