Pairwise Alignments

Query, 306 a.a., D-alanine--D-alanine ligase from Pectobacterium carotovorum WPP14

Subject, 364 a.a., D-alanine--D-alanine ligase A (EC 6.3.2.4) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  160 bits (406), Expect = 3e-44
 Identities = 112/350 (32%), Positives = 177/350 (50%), Gaps = 52/350 (14%)

Query: 4   KVAVLLGGTSAEREVSLLSGQ------------AVLAGLKDAG---IN------------ 36
           +V ++ GG SAE EVSL S +             VL G+  AG   +N            
Sbjct: 5   RVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKAGQWHVNDAENYLQNADDP 64

Query: 37  AHAVDTRDVSVTTLKEEGFTK-----------------IFIALHGRGGEDGTLQGVLEFL 79
           AH +  R  +++  +  G  +                 IF  +HG  GEDG+LQG+L   
Sbjct: 65  AH-IALRPSAISLAQVPGKHQHQLINAQNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVA 123

Query: 80  GLPYTGSGVMASALTMDKLRTKQVWQAVGLPVSPYVALDRRQYSETAANALLAKFTHLGL 139
            LP+ GS V++SA  MDK   K++ +  GL ++P++ L R   +   A +     + LGL
Sbjct: 124 NLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFITLTR---TNRHAFSFAEVESRLGL 180

Query: 140 PLIVKPSREGSSVGMSKVNTLSELPAALEEAFRHDDDILVEKWLSGPEYTVAILGDEVLP 199
           PL VKP+ +GSSVG+SKV   ++   A+  AF  D  ++VE+ + G E   A+LG++   
Sbjct: 181 PLFVKPANQGSSVGVSKVANEAQYQQAVALAFEFDHKVVVEQGIKGREIECAVLGNDNPQ 240

Query: 200 SI---RIQPAGTFYDYEAKYLSDD-TQYFCPSGLPDEQEQALAGLAMAAYRAVGCSGWGR 255
           +     I     FY Y+ KY+ D+  Q   P+ +P E    +  +A+ AY+ +GC+G  R
Sbjct: 241 ASTCGEIVLNSEFYAYDTKYIDDNGAQVVVPAQIPSEVNDKIRAIAIQAYQTLGCAGMAR 300

Query: 256 VDFMLDSDGAFYLLEVNTSPGMTSHSLVPMAARQRGLTFSQLVVKILERA 305
           VD  L +D    + E+NT PG T+ S+ P   +  GL ++ L+ +++E A
Sbjct: 301 VDVFLTADNEVVINEINTLPGFTNISMYPKLWQASGLGYTDLISRLIELA 350