Pairwise Alignments

Query, 488 a.a., TolC family protein from Pectobacterium carotovorum WPP14

Subject, 483 a.a., multidrug RND transporter from Pseudomonas simiae WCS417

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 83/354 (23%), Positives = 153/354 (43%), Gaps = 23/354 (6%)

Query: 133 QADSVGLSRNDGANITVIQPLLRG--AGKEVTTAPVHIAQLTEQLNRLTLKSTVSQTITQ 190
           Q D+    RN GA+      L  G  A  E        AQ+ +Q  RLTL + V++    
Sbjct: 125 QGDAYSTVRNIGASFNYNFDLWGGQRAAWEAALGEARAAQVDQQAARLTLAANVAK---- 180

Query: 191 IISAYRELLRSQEQLQIARDALARARQLVEVNRAMIAAGRMAEFEIVQTEAEVATQELAH 250
              AY +L ++     +A D L R RQ++++++  + +G  + ++  QTE+  A+ +   
Sbjct: 181 ---AYSDLGQAHIVRDLANDDLKRTRQMLDLSKRRLDSGIDSHYQYQQTESLEASSQSQL 237

Query: 251 EEARNQLDTARLALLQLLAL--DLNTLIVATESMQAQRVDVNAAQALKQAE--ASRPAYL 306
            +A  QL +A++AL  LL    D    +     ++   V   A  ++  AE    RP  +
Sbjct: 238 IDAEKQLQSAKIALAVLLGKGPDRGNELARPHVLKPSAV---AVPSVLPAELLGRRPDLI 294

Query: 307 AQLIANEQAALGLAVARNDRLW---DVSLIGGASQVRDRAAQSSTSRTWENYVGVQVEIP 363
           A     E A   +  ++  R +   ++S   GA  +   A   S SR +   +   + +P
Sbjct: 295 AARWRVEAAGKSIDASKT-RFYPNLNLSASAGAESLLGDAMFGSASRFFN--IAPTISLP 351

Query: 364 IGDLSTRQAEVQAR-VNVRNQHIQLDEVRQQLERDVTNAVRDIGTRWRQFEISQRARDLS 422
           I D    +A++ AR  +      Q ++   Q   D+ N +  +    RQ +  Q A D++
Sbjct: 352 IFDGGRLRADLDARDADYDLAVAQYNKTLVQALGDIGNTLSQLRDTGRQIQAQQHAADIA 411

Query: 423 RRKLEIEREKLTVGRSSNFQVLSFENDLRNAENARLNALIGYLNAQAELDETLG 476
           ++  +   ++ + G  +   VLS E  L  A+          ++   +L + LG
Sbjct: 412 QQSYDTGVQRYSAGIGNYLDVLSIEQQLLQAQRQLATLNAAQIDLSIQLMQALG 465