Pairwise Alignments

Query, 350 a.a., amino acid ABC transporter substrate-binding protein from Pectobacterium carotovorum WPP14

Subject, 305 a.a., putative amino-acid transporter subunit from Escherichia coli BL21

 Score =  304 bits (779), Expect = 2e-87
 Identities = 145/304 (47%), Positives = 200/304 (65%), Gaps = 2/304 (0%)

Query: 48  CGVHPARHGFSAIDSKGQWTGLDVDYCRALAAAIFGDANKVRFAALSTAQRFPAIQSGEV 107
           CG+     GFS  D+ G+++G+DVD CR +AAA+FGD  KV++  L+  +RF A+QSGEV
Sbjct: 3   CGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEV 62

Query: 108 DVLSRNITADLSRDTSLGLNFAPPTFYTGTGFMVRTSANVKKVEDLDGATVCITPGSSTE 167
           D+LSRN T   SRD  +G+ F   T+Y G GF+    A +K  ++LDGATVCI  G+ TE
Sbjct: 63  DLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTE 122

Query: 168 RNVAQIFASRNLHYTPVVIENNKEYVAAYLSGRCDVIARDKVALPGVRTFDAEKPSDHVI 227
            NVA  F + N+ YTPV  + + E   A  SGRCD +A D+  L  +R      P++ ++
Sbjct: 123 LNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALR-IKLSNPAEWIV 181

Query: 228 LPGIYSKEPLAMAVRQGDDQWYDIVKWVVYATFNAEEMEIGQQNVDSKLKS-TDPDIQAL 286
           LP + SKEPL   VR+GDD+W+ IV+W ++A  NAEEM I  QNVD K  +   PD+  L
Sbjct: 182 LPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHL 241

Query: 287 LGVTGDYGQKLGLNNQWAYNLIKQVGNYGDIYNRHFGPDTPAPLERDLNNLWTKGGLLYG 346
           LG  GDYG+ L L+N+WAYN+IKQVGNY +I+ R+ G ++P  ++R  NNLW  GG+ Y 
Sbjct: 242 LGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYA 301

Query: 347 LPIR 350
            P+R
Sbjct: 302 PPVR 305