Pairwise Alignments

Query, 300 a.a., dipeptide ABC transporter permease DppC from Pectobacterium carotovorum WPP14

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli BL21

 Score =  233 bits (593), Expect = 5e-66
 Identities = 127/265 (47%), Positives = 168/265 (63%), Gaps = 6/265 (2%)

Query: 33  VVGMVYVVLMLIIAIGANVLAPHAPAEQFRDALLRPPVWQEGGSWQFILGTDDVGRDVLS 92
           V G V +VLML++ I +  LA H P      A L PP       W    GTD+VGRD+ S
Sbjct: 34  VTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPP---SAAHW---FGTDEVGRDLFS 87

Query: 93  RLMYGARLSLLVGCLVVALSLVLGVIFGLLAGYFGGVVDALIMRIVDIMLALPSLLLALV 152
           R++ G++ S+L G +VVA++ ++G + G L+G  GG  DA+IMRI+DIML++PSL+L + 
Sbjct: 88  RVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMA 147

Query: 153 LVAVFGPSIVNASLALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGASSARQMFVNIL 212
           L A  GPS+ NA LA+  V +P YVRL R   LV     YV A++  GAS    +  +IL
Sbjct: 148 LAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHIL 207

Query: 213 PNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFP 272
            N L PLIVQASL   +AIL  A LGF+G+GAQ P+ EWG M+++   +    WW   FP
Sbjct: 208 RNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFP 267

Query: 273 GLAILLTVLAFNLMGDGLRDALDPK 297
           G AILLT + FNL GDG+RD LDPK
Sbjct: 268 GAAILLTAVGFNLFGDGIRDLLDPK 292