Pairwise Alignments

Query, 300 a.a., dipeptide ABC transporter permease DppC from Pectobacterium carotovorum WPP14

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  264 bits (675), Expect = 2e-75
 Identities = 133/276 (48%), Positives = 185/276 (67%), Gaps = 6/276 (2%)

Query: 23  WHYFKRNKGAVVGMVYVVLMLIIAIGANVLAPHAPAE-QFRDALLRPPVWQEGGSWQFIL 81
           W  F  N+ A++G+V ++ +L +A+ A+VLAPH P +   R+A L PP     G+  ++L
Sbjct: 36  WRRFSENRLALLGLVIIIALLFVALFADVLAPHNPVQGDLRNARLLPP-----GTAGYLL 90

Query: 82  GTDDVGRDVLSRLMYGARLSLLVGCLVVALSLVLGVIFGLLAGYFGGVVDALIMRIVDIM 141
           GTDD GRD+LSRL++G+RL+L V  LV  ++  +G+I G ++GY GG VDA++MRI DI 
Sbjct: 91  GTDDQGRDILSRLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAGGWVDAILMRITDIF 150

Query: 142 LALPSLLLALVLVAVFGPSIVNASLALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGA 201
           LA P L+LAL LVA  GP I NA LA+   + P Y R+ RA  +   N D++ A ++ GA
Sbjct: 151 LAFPKLVLALALVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDFIAAVKLMGA 210

Query: 202 SSARQMFVNILPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQF 261
           S  R +  +++P CL+ LIV+ +L  +  IL  A LGFLG+GAQPP PEWG M++   +F
Sbjct: 211 SPFRIVLKHVMPLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMIASGRRF 270

Query: 262 AQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPK 297
               WWV   PG+AIL+  L FNL+GDGLRDALDPK
Sbjct: 271 ILDQWWVAAMPGIAILIVSLGFNLLGDGLRDALDPK 306