Pairwise Alignments

Query, 300 a.a., dipeptide ABC transporter permease DppC from Pectobacterium carotovorum WPP14

Subject, 300 a.a., ABC transporter, membrane spanning protein (dipeptide) from Agrobacterium fabrum C58

 Score =  238 bits (608), Expect = 1e-67
 Identities = 124/275 (45%), Positives = 171/275 (62%), Gaps = 6/275 (2%)

Query: 23  WHYFKRNKGAVVGMVYVVLMLIIAIGANVLAPHAPAEQFRDALLRPPVWQEGGSWQFILG 82
           W   K N  AV+G+  +VL + +++ A  +AP+ PA Q     L  P       W    G
Sbjct: 30  WLNLKSNPLAVIGLTIIVLFIALSLLAPAIAPYDPATQNLGNRLAFP---NAEHW---FG 83

Query: 83  TDDVGRDVLSRLMYGARLSLLVGCLVVALSLVLGVIFGLLAGYFGGVVDALIMRIVDIML 142
           TD++GRD+LSR++YG R++L +   VV L   +G+  G +AGYFGG+VD ++MR+ D+ L
Sbjct: 84  TDELGRDILSRILYGGRVTLGMVIAVVVLVAPIGLAIGCIAGYFGGIVDTVLMRVTDVFL 143

Query: 143 ALPSLLLALVLVAVFGPSIVNASLALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAS 202
           A P L+LAL  VA   P + +A LA+   A P Y RL RA  +     D+V A R+ GAS
Sbjct: 144 AFPRLILALAFVAALKPGVESAILAIALTAWPPYARLARAETMTVRGSDFVAAYRLTGAS 203

Query: 203 SARQMFVNILPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFA 262
           + R +  +I P C+  LIV+ +L  S+ I+  A+LGFLGMGAQPP+PEWG M++   +F 
Sbjct: 204 AWRIIARHIAPLCVPSLIVRITLDMSSIIITAASLGFLGMGAQPPSPEWGAMIATAKRFI 263

Query: 263 QSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPK 297
              WWV T PG+AI L  LAFN +GDGLRD LDPK
Sbjct: 264 FEQWWVATIPGIAIFLVSLAFNFLGDGLRDVLDPK 298