Pairwise Alignments

Query, 819 a.a., hypothetical protein from Methylophilus sp. DMC18

Subject, 897 a.a., Sensory box/GGDEF family protein from Pseudomonas sp. S08-1

 Score =  295 bits (755), Expect = 8e-84
 Identities = 167/431 (38%), Positives = 256/431 (59%), Gaps = 5/431 (1%)

Query: 354 RIQRLAFNDELTGLSNRLAFTQGVHQAMLAHAQSNAKLSILVINIHRFKPINKTLGRDFG 413
           RI+RLA++D LTGL NR  F + + +    H       S+L+++I  FK IN +LG   G
Sbjct: 465 RIERLAYSDNLTGLGNRPYFIRCLEERFARH--DGQAFSLLLVDIDNFKRINDSLGHQTG 522

Query: 414 DDLLRHVGQVLKQHVLSEQDMVARLDADEFAVLLQHADQAQATRFADAIQQVFEQPVQVQ 473
           D LL ++ + L+   LS+   +AR  ++EFAVLL  A+Q    + A  +    ++P+ V 
Sbjct: 523 DKLLTNLARRLRNS-LSQNTSLARFASNEFAVLLDGAEQEAGLKLAQELLATLDKPLFVD 581

Query: 474 GQAIDVQAGMGIALYPEHGMDEESLLNHAETALQESRLKKTPWI-VYNTSLEIDQSETLT 532
            Q I V   +G+A  P HG D   L+ HA  AL +++      + ++  +L  + S  L 
Sbjct: 582 NQLISVTGSVGLACAPLHGDDPHVLMKHAGLALHKAKANGKHQVQLFTEALNAEASYKLF 641

Query: 533 LISDLKEAIQQNQLLLYIQPKVDVSTRRALGGEALIRWVHPQKGMIFPDQFIPFAEQTGI 592
           + ++L+ A+ QN+L +Y QPK+ + + + LG EAL+RW HP+KGMI PDQFI  AE+TG+
Sbjct: 642 VENNLRRALTQNELEVYYQPKLCLKSGQLLGLEALLRWQHPEKGMISPDQFISVAEETGL 701

Query: 593 ISDLTQWMLRRACEALADFKKQGL-HISLAVNLSTRDLNNMELPQQIADLLAAHGLTTKS 651
           I  + +W++R+AC A  +    G+  I +A+NLS +   + +L   IA +L    L    
Sbjct: 702 IIPIGKWVVRQACRASLELSALGMGDIQVAINLSAKQFTDPDLVGSIAAILDEEQLPAHL 761

Query: 652 LKLEITEGSLMQDPERAEIVVRKLAAMGLHLAIDDFGTGYSSLAYLRQLPVQELKIDRSF 711
           L++E+TE  L++  +     V +L A+GL LA+DDFGTGYSSL+YL++ P+  +KIDRSF
Sbjct: 762 LEVELTESLLLEGNDATRQQVARLKALGLTLAMDDFGTGYSSLSYLKKFPIDVIKIDRSF 821

Query: 712 VMFMDKNAGDASIVKSTIDLAHNLGLIVVAEGIENELVLNQLAKLGCNEGQGYFIGKPMP 771
           +  + +N  D  I  + I +AHNL L VVAEGIE    L  L +  C+ GQGY   +P+P
Sbjct: 822 IKDIPENQDDMEITAAVIAMAHNLRLKVVAEGIETAAQLGFLRRQLCDVGQGYLFDRPIP 881

Query: 772 EKDFSIWLERW 782
            +D    L R+
Sbjct: 882 GRDLVDSLRRY 892