Pairwise Alignments

Query, 589 a.a., hypothetical protein from Methylophilus sp. DMC18

Subject, 795 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score = 97.4 bits (241), Expect = 2e-24
 Identities = 74/231 (32%), Positives = 114/231 (49%), Gaps = 15/231 (6%)

Query: 23  FQPIIDIKQAQVFAHEALIRGPLESK-LHAPIALLNAAKLCGRDIEMESIARDVIFEEYR 81
           FQPI D+   Q    EAL+R     K L +P A+++ A+  G    + ++  D       
Sbjct: 546 FQPIQDLATGQTAGFEALLRLNHPDKGLLSPAAIVSLAEENGTIQRIGNLILDQSIANLA 605

Query: 82  RANHAMPL-----FVNFSPDALLHSESDWSLSLAQ-LENYQLAASDIVIEITESSTIRDY 135
           R +    +      VNFSP   L  E      +A  L  + +  + +VIEITE+  ++D 
Sbjct: 606 RLSRLPGMDQTYVAVNFSP---LQFEPGLPTRIAGVLHRHGILPARLVIEITEAVIMKDD 662

Query: 136 AELKEAVTKLKALGFKIALDDLGEGTSSLRLWSELSPHYVKIDKHFIANIHNDPIKLE-- 193
            +++  +  +  LG +IALDD G G SSL   S      VKID+ F  +I +D + +   
Sbjct: 663 PQIRAILNAIHQLGCRIALDDFGTGYSSLSYLSRFPVDIVKIDQSFTRSICDDTVDIRQR 722

Query: 194 ---FVRGIQKIALESNTLTIAEGIETKEELAVIKDLKIDYAQGYLLGRPFP 241
               V GI  I+ + N   IAEG+ET+E+  ++ D+  D+ QGY   RP P
Sbjct: 723 SRMLVEGIAAISHKMNCTVIAEGVETEEQKDLLTDMGADFGQGYYFARPQP 773



 Score = 38.5 bits (88), Expect = 1e-06
 Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 2/91 (2%)

Query: 433 ERRIAFVAC-YCDLDHFKPFNDAYGYRRGDEVIQFVGRMLSSMVNHEHDFVGHIGGDDFV 491
           +R  + +AC + DLD FK  ND  G+  GD V++     L  ++    D    +GGD+F 
Sbjct: 380 DRNGSELACLFIDLDRFKAINDNLGHAAGDAVLKQFTLKLEPLLT-PLDSASRLGGDEFA 438

Query: 492 IVFQSEDWERICRDILDTVAKVMPDFYDLKD 522
           I+   +  E    +  + V  ++   +++++
Sbjct: 439 ILLAGDKVEERALEFCERVCAMLDMPFEIEN 469