Pairwise Alignments

Query, 311 a.a., Motility protein B from Methylophilus sp. DMC18

Subject, 353 a.a., flagellar motor protein MotD from Rhodanobacter sp. FW510-T8

 Score =  132 bits (332), Expect = 1e-35
 Identities = 96/321 (29%), Positives = 158/321 (49%), Gaps = 15/321 (4%)

Query: 3   RRHKLEDEEESHERWLISYADFITLLFAFFVVMYATSNINLNKYRALSSSVVNAFQGQPG 62
           RRH+ E E ++HE W I YAD +TLL AFFVVMYA S +N  K+R +S S++ AF G   
Sbjct: 2   RRHRHE-EHQNHEAWAIPYADLMTLLLAFFVVMYAVSVVNEGKFRVMSESLIEAFNGSSH 60

Query: 63  AVG--QPQNMPQGLQTPGLPVPGAQNQNGQVPSAV-MKPLPL-----SYLYQEKKLRDQE 114
           A+    P  +      P +  P  Q+ +  VP AV + P P+     S      + R QE
Sbjct: 61  AIAPLPPTRIRPHNVAPAIAAPAGQSGSSIVPIAVPIPPHPVPASGGSGREAAHRSRPQE 120

Query: 115 KIRAMAQQLANTLGQWIEQKQITVYQSDLGVEMDISTHLLFQNNQAAYTPQASQILHIIS 174
           ++  +  Q+   L   I++K + V      +E++I T +LF +  A  +  A+ +L  ++
Sbjct: 121 ELGRIEDQVRKALQPLIDRKLVVVRHKPDWLEVEIRTDILFPSGVAQLSDPANAVLRDLA 180

Query: 175 AQLKNEYRTLQVEGHSDKHTFSGMVDAESKRWTLTATQAARVAATLAADGIAAKRLSALG 234
           A L      L+VEG +D    +         W L+A +AA VA   A +GIA  RL  +G
Sbjct: 181 AILARFANQLRVEGFTDDVPIN--TSLYPSNWELSAARAASVARLFATNGIAPDRLGIIG 238

Query: 235 LAETRPVSSSDNNLAQSLNSRITLRIL-TAEAGEQLTTNLANRQEVSPAEPEATAEI-PT 292
             E RP++ +     ++ N R+ + ++   +A ++  ++  +  +VS   P    ++ PT
Sbjct: 239 WGEVRPIADNATAEGRNQNRRVLVVVMGNGQAAQRGQSDAGHVDQVSGLVPAPVPDVLPT 298

Query: 293 MAT--PATLPSAMTNKRNSQP 311
           +        P A    R++ P
Sbjct: 299 VRVFGSPEAPPAREGDRSAAP 319