Pairwise Alignments

Query, 311 a.a., Motility protein B from Methylophilus sp. DMC18

Subject, 308 a.a., flagellar motor protein MotB from Escherichia coli ECRC100

 Score = 70.5 bits (171), Expect = 5e-17
 Identities = 77/311 (24%), Positives = 131/311 (42%), Gaps = 33/311 (10%)

Query: 3   RRHKLEDEEESHERWLISYADFITLLFAFFVVMYATSNINLNKYRALSSSVVNAFQGQPG 62
           +R K +    +H  W I+YADF+T + AFF+VM+    I+++  + L    +  +   P 
Sbjct: 12  KRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWL---ISISSPKELIQ--IAEYFRTPL 66

Query: 63  AVGQPQNMPQGLQTPGLPVPGAQNQNGQVPSAVMKPLPLSYLYQEKKLRDQEKIRAMAQQ 122
           A          +     P+PG  +   Q    V K   +  L   KK  +Q ++R    +
Sbjct: 67  ATAVTGG--DRISNSESPIPGGGDDYTQSQGEVNKQPNIEEL---KKRMEQSRLR----K 117

Query: 123 LANTLGQWIEQK----------QITVYQSDLGVE-MDISTHLLFQNNQAAYTPQASQILH 171
           L   L Q IE            +I + Q  L ++ +D     +F+   A   P    IL 
Sbjct: 118 LRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILR 177

Query: 172 IISAQLKNEYRTLQVEGHSDKHTFSGMVDAESKRWTLTATQAARVAATLAADGI-AAKRL 230
            I+  L      + + GH+D   ++      S  W L+A +A      L   G+ + K L
Sbjct: 178 AIAPVLNGIPNRISLSGHTDDFPYASGEKGYS-NWELSADRANASRRELMVGGLDSGKVL 236

Query: 231 SALGLAETRPVSSSDNNLAQSLNSRITLRILTAEAGEQLTTNLANRQEVSPAEPEATAEI 290
             +G+A T  +  SD     ++N RI+L +L  +A + +    A  Q     EP +  E 
Sbjct: 237 RVVGMAAT--MRLSDRGPDDAVNRRISLLVLNKQAEQAILHENAESQN----EPVSALEK 290

Query: 291 PTMATPATLPS 301
           P +A   ++P+
Sbjct: 291 PEVAPQVSVPT 301