Pairwise Alignments

Query, 773 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

Subject, 514 a.a., PAS domain-containing sensor histidine kinase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  158 bits (400), Expect = 6e-43
 Identities = 113/389 (29%), Positives = 184/389 (47%), Gaps = 39/389 (10%)

Query: 407 DLTHQNDQLRRSARDLFLINSIVDSSAELAFLADGEWNLIYANPFALEKLGWSLDQMSGR 466
           DL    + LR S      INSI+ ++ +     D    +   NP A     +   ++ GR
Sbjct: 131 DLKKTEEALRESESK---INSIIQTAVDGIITIDRRGVMEMVNPAAARLFEYEEHELIGR 187

Query: 467 RLDAIADSLAVPAADGDRHSWRFEAALPTHDGRALPVEVLARDLLHEGVLYHVALA---- 522
           +++ +     +P  D   H         T + R + +      L   G ++ + L+    
Sbjct: 188 KINML-----MPEPDQSLHDNYMHHYHETGERRIIGIGREVSGLKKSGTIFPLYLSISEV 242

Query: 523 ------------RDITERQRWEADLCAKTAQLEHSNADLEQFAYVASHDLREPLRMVSSY 570
                        DIT+++  E  L    A+LE SN +L+ FAYV+SHDL+EPLR + ++
Sbjct: 243 QLTDRKVYTGFIHDITQQKLSEERLRRYAAELERSNRELQDFAYVSSHDLQEPLRKIQAF 302

Query: 571 LSLLERRYGQLLDSDGLEFLGFAKDGAQRLDRLVLDLLEFSRIDRRGSPLAPMPVRPAVD 630
              L+ +  + L   G +++    + A R+  L+ DLL+FSR+  +      + +   + 
Sbjct: 303 GDRLKTKEYEKLSDQGKDYVDRMLNAASRMQNLINDLLDFSRVTSKSKAFVQVSLDSVLT 362

Query: 631 VAARNLSVAMAEGGATLVLEDALDRAVVLGDSGQITRLLQNLIGNAIKYRSDGRPPRIVI 690
               +L + + + GA +          +  D  Q+ +L QNL+ NAIK+R +   P+I I
Sbjct: 363 DVLSDLEITIEKTGAQI---QRAPLPHIEADPTQLRQLFQNLVSNAIKFRKENEQPQINI 419

Query: 691 GCRR-----------DGACWELSVSDNGIGIEPQYFERIFGIFQRLHTRDRFEGTGIGLA 739
             R                 E+ V DNGIG + +Y +RIF IFQRL  + ++EG+GIGLA
Sbjct: 420 FARELQGKARMTSTPGDEMVEIHVQDNGIGFDEKYLDRIFNIFQRLEGQ-KYEGSGIGLA 478

Query: 740 IAKKIVERHGGRIWVDSRPGEGSSFHFTL 768
           I +KI  RHGG I   S+ G G++F  TL
Sbjct: 479 ICRKIAVRHGGDITAHSQAGIGTTFIVTL 507



 Score = 28.9 bits (63), Expect = 7e-04
 Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 417 RSARDLFLINSIVDSSAELAFLADGEWNLIYANPFALEKLGWSLDQMSGRRLDAIADSLA 476
           R+  D   + +I++++ +     D E  +  ANP A    G+  ++M GR +      + 
Sbjct: 10  RNVDDQSRLKAIIETAVDGIITIDTEGRMESANPAAARIFGYEPEEMIGRNV-----HML 64

Query: 477 VPAADGDRHSWRFEAALPTHDGRAL 501
           +P  D   H    +  + T +G+ +
Sbjct: 65  MPEPDHGLHDGYIKRYMQTGEGQII 89