Pairwise Alignments

Query, 517 a.a., membrane protein from Magnetospirillum magneticum AMB-1

Subject, 492 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  535 bits (1378), Expect = e-156
 Identities = 263/478 (55%), Positives = 352/478 (73%), Gaps = 3/478 (0%)

Query: 38  LGLGVALAALVAIILLPLPAGLHPAGLRMMAIMVFAVIIWMTEAVPYAVSAAVIVSLIAL 97
           LGL + +  +V ++LLPLPA L  AG RM+AI+ FAV++W+TEAV Y  SA +I SL+A 
Sbjct: 15  LGLVIGVLVMVGVLLLPLPADLPVAGQRMLAILAFAVVVWITEAVSYEASAIMITSLMAF 74

Query: 98  ALGLGPALADPTKLMGSSKALGMALSGFSNTAFALVAGAMFISAAMMITGLDKRIALVIL 157
            LG  P+L DPT L+GSS A+ MAL+GFSN A ALVAGA+FI+AAM  TGLD+RIALV L
Sbjct: 75  LLGTAPSLQDPTHLIGSSPAISMALTGFSNPALALVAGALFIAAAMTHTGLDRRIALVTL 134

Query: 158 SRLGARTGRVLAGVIFTGFALSFLVPSTTARVSCMVPIVMGIIVAFGVDRRSRFAAVLMI 217
           +R+G  T  +L G I     LS +VPS TAR +C+VPI+MG++ AFGVD+RS  AA LMI
Sbjct: 135 TRVGTSTRGILLGAIAVTILLSLVVPSATARSACVVPIMMGVVAAFGVDKRSNIAAGLMI 194

Query: 218 ATAQADSLWNVGIKTAAAQNMIAVSFIEKQLHYSVSWLEWFVAAAPFSAVMSVILYFLLM 277
             AQ  S+WNVGI+TAAAQN++ V F++K L   VSW++W +A AP++ +MS +L FL++
Sbjct: 195 VVAQGTSIWNVGIQTAAAQNLLTVGFMDKMLGQRVSWIDWLIAGAPWAVIMSAVLLFLVI 254

Query: 278 KLLPPEVDEIEGGKATIAAKLAELGPMTAGEKKLLTISLILLCFWTTEKVLHDFDTSTTT 337
           KLLPPE D I GGK  +A  L ++GPMT  +K+LLT+S++LL  W TE  LH FDT++TT
Sbjct: 255 KLLPPETDSIPGGKEAVAQSLVDIGPMTGPQKRLLTVSVLLLLAWATEGRLHPFDTTSTT 314

Query: 338 MVAITLMLVPRIGVMDWKDAQARIGWGTLILFGVGISLGQCLLDTGAASWMAKYIVATFG 397
              +  +L+P +GVM WKD Q+RI WGT+I+FGVGISLG  LL T A  W+   +VA  G
Sbjct: 315 YAGLVFLLLPGVGVMTWKDVQSRIPWGTVIVFGVGISLGTALLTTQAGQWLGSQVVAHTG 374

Query: 398 MENFPAIGIVAVLALFLIVVHLGFASATGLAAAMIPIIIAVLQSIKTPG-INIVGMTMIA 456
           ++    +G+ A+L  FLIV+HLGFASAT L +A++PI+IAVLQ++  PG  N +GMTM+ 
Sbjct: 375 LDQVGPLGVFAILGAFLIVIHLGFASATALTSALLPILIAVLQTL--PGEFNRLGMTMLL 432

Query: 457 QYVVSFGFILPVNAPQNMVVYCTETFQSKDFIRTGIPLTIIAYIMILVMSATYWRWLG 514
            +V+S+GFILP+NAPQNMV   T TF ++ F + GI +T+I Y ++LV +ATYW WLG
Sbjct: 433 GFVMSYGFILPINAPQNMVCLGTGTFTARQFAKVGILVTLIGYGLMLVFAATYWSWLG 490