Pairwise Alignments

Query, 761 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 721 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  207 bits (526), Expect = 2e-57
 Identities = 136/347 (39%), Positives = 202/347 (58%), Gaps = 9/347 (2%)

Query: 388 ARTNAIIGAVIILAL--GLLAVWLLARGISLPLQGITRVMHTLAAGDLSVEAPFTHRGDE 445
           AR  A I A ++LAL  G   V +L R I+ P+  +T  M  LA  DLSV+     RGDE
Sbjct: 305 ARAAAAITAALVLALAAGAAVVIVLTRSITRPVGDLTTAMLRLAERDLSVQVTGGDRGDE 364

Query: 446 VGEMARAVEVFKRNALDKRRMEDEAQELRRQEDLARAARDEAAAEHALGVQAK----VAS 501
           +G+MARAV VFK NA    R+E+E +  R    LA A R  A    A  ++ +    VA 
Sbjct: 365 IGDMARAVAVFKENAAAVARLEEEQERARA---LAEAERRAALQAMASTIETETGQVVAK 421

Query: 502 VDKATDAIRSTAKAMSQRSERSGSLSLDMGDAAQITSERATVVSEATRQLALSVDEIAHQ 561
           V+  +    S A++M+  + R    S  +  AA+ +   A  V+ A  +L  S+ EIA Q
Sbjct: 422 VEGGSRQAVSAAESMAASAIRVEDNSQRVAAAAEQSLANAQTVAGAAEELTASIREIASQ 481

Query: 562 VSCANDVTQKTVASVEETASQMEGLSTAVRAIGDIVHLISDIASQTNLLALNATIEAARA 621
           V+ ++ +  + V + ++  + +  L  AV  I  +V +I+ IA QT LLALNATIE+ARA
Sbjct: 482 VASSSSLVAEAVVAADDANTTVATLLDAVSRIDTVVAMIAAIAGQTRLLALNATIESARA 541

Query: 622 GEAGKGFAVVAGEVKHLANQTARATEDISRQVEGIQDSTQGMAERIGEVVGLIRTLDGVS 681
           GEAGKGFAVVA EVK LA+QT   T +I+ ++E ++     + E I   VG+IR ++ ++
Sbjct: 542 GEAGKGFAVVASEVKRLADQTGGQTGEIAGRIEELKAMAAHVGEAISATVGVIRKVETIA 601

Query: 682 SAIAGAIQQQDAATREIASNVEQVARQADKVSGAVSQLAQASAKTCA 728
           S++A A+++QDAAT EIA NV Q A  A +V+  +  +A  + ++ A
Sbjct: 602 SSVAAAVEEQDAATGEIARNVHQSAEAAREVTERIIVVADEARRSGA 648



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 27/145 (18%), Positives = 53/145 (36%), Gaps = 4/145 (2%)

Query: 495 VQAKVASVDKATDAIRSTAKAMSQRSERSGS----LSLDMGDAAQITSERATVVSEATRQ 550
           V A +A++   T  +   A   S R+  +G     ++ ++   A  T  +   ++    +
Sbjct: 516 VVAMIAAIAGQTRLLALNATIESARAGEAGKGFAVVASEVKRLADQTGGQTGEIAGRIEE 575

Query: 551 LALSVDEIAHQVSCANDVTQKTVASVEETASQMEGLSTAVRAIGDIVHLISDIASQTNLL 610
           L      +   +S    V +K        A+ +E    A   I   VH  ++ A +    
Sbjct: 576 LKAMAAHVGEAISATVGVIRKVETIASSVAAAVEEQDAATGEIARNVHQSAEAAREVTER 635

Query: 611 ALNATIEAARAGEAGKGFAVVAGEV 635
            +    EA R+G        + GE+
Sbjct: 636 IIVVADEARRSGAEATSVTALLGEM 660